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D5V193 (D5V193_ARCNC) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine--D-alanine ligase domain protein EMBL ADG94055.1
Gene names
Ordered Locus Names:Arnit_2404
OrganismArcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) (Campylobacter nitrofigilis) [Complete proteome] [HAMAP] EMBL ADG94055.1
Taxonomic identifier572480 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Campylobacteraceae › Arcobacter ›

Protein attributes

Sequence length330 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADG94055.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

D-alanine-D-alanine ligase activity

Inferred from electronic annotation. Source: InterPro

metal ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5V193 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: CF6D1DBF4D927763

FASTA33038,311
        10         20         30         40         50         60 
MKIEIITAEN EKLKENGFGS LAVCTNILNT LKVTYDNTRM NICKSEEDLE KVLKRRPDLV 

        70         80         90        100        110        120 
ILAVKYIELR NKSNILLCDY FKKHNINYTG CEKDVLKYDS NKVLAKSFLR RKGINTADYF 

       130        140        150        160        170        180 
IAMPKEYKEK EFPLEFPVFL KPVNTSNSYG IDEFSLANNF KEYESKILSL YTQFKEPILV 

       190        200        210        220        230        240 
EKYLDGREFT VAIIKKDEKE LLVSAIEILA PLSNSGNNIL SEKVKRENSE KLLIIEDTLL 

       250        260        270        280        290        300 
KNKIEKIAQD SFMYLDIRDY GRIDIKMNKV GECFFLEANL IPGMNERTDY FPRAFKLTQD 

       310        320        330 
LNYDNILEMM VESAIQRVSV INTNNIDTVN

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001999 Genomic DNA. Translation: ADG94055.1.
RefSeqYP_003656562.1. NC_014166.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG94055; ADG94055; Arnit_2404.
GeneID9172579.
KEGGant:Arnit_2404.
PATRIC38117450. VBIArcNit33843_2387.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

BioCycANIT572480:GJ62-2448-MONOMER.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5V193_ARCNC
AccessionPrimary (citable) accession number: D5V193
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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