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D5UYT4 (D5UYT4_TSUPD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length539 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
D5UYT4 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 0EE1885C9BC8E7D0

FASTA53957,196
        10         20         30         40         50         60 
MMAGSLRRQR CPSALSSAYA AVVGPLRHNQ EVLFADVVAA STEVGATRAR TAKIAALTRL 

        70         80         90        100        110        120 
LRDADAADVR PVVAWLSGSL LQERLGTGWR GVAKILDEQV AAATPSLTVA DVSSAFDELA 

       130        140        150        160        170        180 
GTAGAGSVAR RGELLGALFG RATADEQRLL VGLITGEVRH GALAGVMTDA VAHAAGVPLA 

       190        200        210        220        230        240 
TVRRAAMLSG SLPQTASAAL AGGADALAGF GLEVLRGVSP MLASPADDLP AALADLGPEV 

       250        260        270        280        290        300 
SVEFKLDGAR IQVHRNGDAV RVYTRTLRDI TDAVPEIVET AMALPCTSVV LDGESLALTD 

       310        320        330        340        350        360 
AGRPRPFQET MSRFGSAGSM EDERSVLRPF FFDCLHLDGR DLLDEPLSAR LAALEQVAGD 

       370        380        390        400        410        420 
LRIPALTRPS VEQASAHLEA ALAAGHEGVM VKGLDSPYAA GRRGRAWQKV KQSYTLDLVV 

       430        440        450        460        470        480 
LGAEWGYGRR TGLLSNLHLG ARDPDGGEPI MVGKTFKGLT DALLRWQTEE FPRHERQRSE 

       490        500        510        520        530 
HTVYLRPEIV VEIELDGVQR SRRYPGGVAL RFARVLRYRP DKTAAEADTI DAVRALLPG 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001966 Genomic DNA. Translation: ADG80387.1.
RefSeqYP_003648726.1. NC_014158.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG80387; ADG80387; Tpau_3810.
GeneID9157990.
KEGGtpr:Tpau_3810.
PATRIC38310977. VBITsuPau718_3817.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000036008.
KOK01971.

Enzyme and pathway databases

BioCycTPAU521096:GI2W-3851-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5UYT4_TSUPD
AccessionPrimary (citable) accession number: D5UYT4
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 16, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)