Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Glutamate decarboxylase

Gene

Tpau_1616

Organism
Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciTPAU521096:GI2W-1634-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Tpau_1616Imported
OrganismiTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)Imported
Taxonomic identifieri521096 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeTsukamurellaceaeTsukamurella
ProteomesiUP000001213 Componenti: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D5UYD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPREQGEITA ARGALPTGRF AGSVRRMSEF STPLDDDSVL MPAYSGRLGT
60 70 80 90 100
EPVPRARLAD HETGPAEAYR FIHDELMLDG QSRMNLATFV TTWMEPQGQA
110 120 130 140 150
LMAEAFDKNA IDHDEYPATS AIDARTVAIV AELFHAPGLD PADPLSATGT
160 170 180 190 200
TTIGSSEAVM LAGLALKWRW RKARLAAGGD ASRPKLVLGS NVQVVWEKFC
210 220 230 240 250
RYFDVEPVYL PIAPGRYTIT PEQVRDAVDA DTIGAVAILG TTFTGEYEDV
260 270 280 290 300
AGICAALDAV AESGGPDVPV HVDAASGGFV APFLDPDLEW DFRLPRVASI
310 320 330 340 350
NVSGHKFGLT YPGIGFVVFR DRAALDEDLV FRVNYLGGDM PTFTLNFSRP
360 370 380 390 400
GAQIIGQYYN FVRLGRHGYT RVMESLRGTA TWLARQLAAQ PYLSVITDGS
410 420 430 440 450
ALPVVTLHLA DDAPFTAFDV SHELRTCGWQ VPAYTMPADA QEVTVLRIVV
460 470 480
REGFSGDLAG KLRDDFAAAL TRLSAADGRA APRSVFHY
Length:488
Mass (Da):52,847
Last modified:July 12, 2010 - v1
Checksum:i65756B374C3A0B95
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001966 Genomic DNA. Translation: ADG78237.1.
RefSeqiYP_003646576.1. NC_014158.1.

Genome annotation databases

EnsemblBacteriaiADG78237; ADG78237; Tpau_1616.
KEGGitpr:Tpau_1616.
PATRICi38306499. VBITsuPau718_1606.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001966 Genomic DNA. Translation: ADG78237.1.
RefSeqiYP_003646576.1. NC_014158.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG78237; ADG78237; Tpau_1616.
KEGGitpr:Tpau_1616.
PATRICi38306499. VBITsuPau718_1606.

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.

Enzyme and pathway databases

BioCyciTPAU521096:GI2W-1634-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040Imported.

Entry informationi

Entry nameiD5UYD0_TSUPD
AccessioniPrimary (citable) accession number: D5UYD0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 12, 2010
Last sequence update: July 12, 2010
Last modified: March 31, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.