D5URT4 (D5URT4_TSUPD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595

Gene names

Name:	ppc HAMAP-Rule MF_00595
Ordered Locus Names:	Tpau_2536 EMBL ADG79139.1

Organism

Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum) [Complete proteome] [HAMAP] EMBL ADG79139.1

Taxonomic identifier

521096 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Tsukamurellaceae › Tsukamurella › Tsukamurella paurometabola

Protein attributes

Sequence length	921 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS022805
Catalytic activity	Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129
Cofactor	Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129
Subunit structure	Homotetramer By similarity. HAMAP-Rule MF_00595
Sequence similarities	Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Ontologies

Keywords
Biological process	Carbon dioxide fixation HAMAP-Rule MF_00595 SAAS SAAS018129
Ligand	Magnesium HAMAP-Rule MF_00595 SAAS SAAS018129 Pyruvate EMBL ADG79139.1
Molecular function	Lyase HAMAP-Rule MF_00595 SAAS SAAS018129 EMBL ADG79139.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: HAMAP oxaloacetate metabolic process Inferred from electronic annotation. Source: HAMAP tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: HAMAP phosphoenolpyruvate carboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	146	1	By similarity HAMAP-Rule MF_00595
	Active site	583	1	By similarity HAMAP-Rule MF_00595

Sequences

	Sequence		Length	Mass (Da)
	D5URT4 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: 15A20D28394A927C	FASTA	921	101,575
	10 20 30 40 50 60 MTSEPARAAT EPLRDDIRLL GGILGDTVRE QAGERIFDLV ENARQESFRV RRSEIDREQL 70 80 90 100 110 120 AAMFTDLPTA EAVPVIRALS HFALLANLAE DLHRERRRAI HVRAGEAPQA SSLAHTYTLL 130 140 150 160 170 180 EDAGLDGDAV RAALRHALVV PVITAHPTET RRRTVFDTQH RITELMRYRD RTQLDPREEE 190 200 210 220 230 240 QVQVNLRRQI LTLWDTALVR LERLRIQDEV VNGLRYFDAA FLEVMPQINH EIRTRLRELY 250 260 270 280 290 300 PGTGLLSEPI LRPGSWIGGD RDGNPYVTGE VVTMASRRAA ATALEHYLRQ LLELEKELAL 310 320 330 340 350 360 SLRLTTVSDE LLALAEWDTS PKQADEPYRR ALRWIRGRLS TTAADLLDEP LDAGIDIDAP 370 380 390 400 410 420 RYGGPSELLA DLAVVDASLR TAGDGLIADA RLQDLREALN TFGFHLSGLD MRQNSDVHEE 430 440 450 460 470 480 TISELFAWAG VHPDYASLDE SDRVRLLTDE LRLRRPLVGP GAEFTEQTAK ELGVLHAAAD 490 500 510 520 530 540 AVANLGPGAV PNYIISMCTS VSDLLEAAVL LKEAGLLRPG DGSAADAVAT CSVNIVPLFE 550 560 570 580 590 600 TIEDLQQGAA TMRAAFEVPV YRSLVDGKGG LQEIMLGYSD SNKDGGYLAA NWALYRAELD 610 620 630 640 650 660 LVAMARDAGV TLRLFHGRGG TVGRGGGPSY DAILAQPPGA VRGTLRLTEQ GEIIAAKYAE 670 680 690 700 710 720 PALATRNLES LLAATLESTL LDVEGLGDDA EEAYAVLDEL AALAREAYGD LVHRTDGFVE 730 740 750 760 770 780 YFTTSTPVEE IGSLNIGSRP SSRKQTSKIS DLRAIPWVMA WSLSRVMLPG FYGTGAAIEK 790 800 810 820 830 840 WIDGGPSRLE QLRALYRRWP FFQTVLSNMA QVLAKSDLGL AARYAELVPD AALRERVFGK 850 860 870 880 890 900 IADEHRRTIE MYYAIAETDD LLADNPALKR SVFNRFPYLE PLNHLQVELL RRYRAGDTDP 910 920 QVQRGILLTM NGLATALRNS G

References

[1]

"The complete chromosome of Tsukamurella paurometabola DSM 20162." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C., Tapia R., Han C. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Brambilla E., Klenk H.-P., Eisen J.A. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001966 Genomic DNA. Translation: ADG79139.1.
RefSeq	YP_003647478.1. NC_014158.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG79139; ADG79139; Tpau_2536.
GeneID	9156697.
KEGG	tpr:Tpau_2536.
PATRIC	38308379. VBITsuPau718_2535.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000238647.
KO	K01595.
Family and domain databases
HAMAP	MF_00595. PEPcase_type1.
InterPro	IPR021135. PEP_COase. IPR018129. PEP_COase_AS. IPR022805. PEP_COase_bac/pln-type. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view]
Pfam	PF00311. PEPcase. 1 hit. [Graphical view]
PRINTS	PR00150. PEPCARBXLASE.
SUPFAM	SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITE	PS00781. PEPCASE_1. 1 hit. PS00393. PEPCASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5URT4_TSUPD

Accession

Primary (citable) accession number: D5URT4

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)