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D5UQM2 (D5UQM2_TSUPD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length778 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5UQM2 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: CE6C63968BDE0339

FASTA77885,291
        10         20         30         40         50         60 
MAQTRENREV DGVHVQLTNL DKVLYPATGT TKAEVIDYYQ AIAPVAVPHL RDRPLTRKRW 

        70         80         90        100        110        120 
PNGVDKTAFF EKRLPSHAPA WIRRGAQHHS DGESLYPVVE NTADMVWLGQ QAALELHVPQ 

       130        140        150        160        170        180 
WTFIADGENE EPGPPDRLVL DLDPGPGSTL DDCAALALRI RDLLAAMGLD GHPVTSGSKG 

       190        200        210        220        230        240 
MHIYSTLPGG LSSPGARKVA HAIASQLEAE SPELVTASMS KDQRGGRIFV DWSQNSGSKT 

       250        260        270        280        290        300 
TISPYSLRGR EHPWVAAPRS WDELSRPGLQ QLEFHDVLAR VRTSGDLLAP LLSGTPAPPE 

       310        320        330        340        350        360 
PVDLDEYRAK RDAAKTPEPF GGAASTGDPI FVIQEHHARR LHYDFRLEHD GVLASWAVPK 

       370        380        390        400        410        420 
NLPDDPAVNH LAVRTEDHPM DYAAFEGSIP KGEYGGGDVS IWDHGTYELE KWRKDEVIVT 

       430        440        450        460        470        480 
LHGARLRGLR YALIRTGEKN WLAHLTKDKT APAKAAAAQA PDPMLPSEST IDRLSGEDWA 

       490        500        510        520        530        540 
FEGKWDGYRI MATVRGGALS LRTRSGRVVT GEFPEFESLA RDLDGMDVVL DGEAVVLDDA 

       550        560        570        580        590        600 
GVPSFHLMAG GESRTGAVRL YLFDVLELNG VDLTKRPWSV RREVLESLAP LLDSDDSIGV 

       610        620        630        640        650        660 
PALVEASTGL VAATLSAERG WEGIVAKRRD SPYLPGQRVR AWLKHKNWRD LQVAIGGWKP 

       670        680        690        700        710        720 
GKGSRANRIG SVLVGLPAET GLVYLGSVGS GLRDRDLDAL AQRLEPLRMK RSPFTASIDD 

       730        740        750        760        770 
PDARDAVWVL PQVVGDVRYS SLRRGGHLRQ PSWRGFRDDL LPGDLPGEAE IPWEGPDE 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001966 Genomic DNA. Translation: ADG76855.1.
RefSeqYP_003645194.1. NC_014158.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG76855; ADG76855; Tpau_0201.
GeneID9154335.
KEGGtpr:Tpau_0201.
PATRIC38303657. VBITsuPau718_0202.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.

Enzyme and pathway databases

BioCycTPAU521096:GI2W-204-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5UQM2_TSUPD
AccessionPrimary (citable) accession number: D5UQM2
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: April 16, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)