Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

D5UQM2

- D5UQM2_TSUPD

UniProt

D5UQM2 - D5UQM2_TSUPD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Tpau_0201

Organism
Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTPAU521096:GI2W-204-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Tpau_0201Imported
OrganismiTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)Imported
Taxonomic identifieri521096 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeTsukamurellaceaeTsukamurella
ProteomesiUP000001213: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5UQM2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQTRENREV DGVHVQLTNL DKVLYPATGT TKAEVIDYYQ AIAPVAVPHL
60 70 80 90 100
RDRPLTRKRW PNGVDKTAFF EKRLPSHAPA WIRRGAQHHS DGESLYPVVE
110 120 130 140 150
NTADMVWLGQ QAALELHVPQ WTFIADGENE EPGPPDRLVL DLDPGPGSTL
160 170 180 190 200
DDCAALALRI RDLLAAMGLD GHPVTSGSKG MHIYSTLPGG LSSPGARKVA
210 220 230 240 250
HAIASQLEAE SPELVTASMS KDQRGGRIFV DWSQNSGSKT TISPYSLRGR
260 270 280 290 300
EHPWVAAPRS WDELSRPGLQ QLEFHDVLAR VRTSGDLLAP LLSGTPAPPE
310 320 330 340 350
PVDLDEYRAK RDAAKTPEPF GGAASTGDPI FVIQEHHARR LHYDFRLEHD
360 370 380 390 400
GVLASWAVPK NLPDDPAVNH LAVRTEDHPM DYAAFEGSIP KGEYGGGDVS
410 420 430 440 450
IWDHGTYELE KWRKDEVIVT LHGARLRGLR YALIRTGEKN WLAHLTKDKT
460 470 480 490 500
APAKAAAAQA PDPMLPSEST IDRLSGEDWA FEGKWDGYRI MATVRGGALS
510 520 530 540 550
LRTRSGRVVT GEFPEFESLA RDLDGMDVVL DGEAVVLDDA GVPSFHLMAG
560 570 580 590 600
GESRTGAVRL YLFDVLELNG VDLTKRPWSV RREVLESLAP LLDSDDSIGV
610 620 630 640 650
PALVEASTGL VAATLSAERG WEGIVAKRRD SPYLPGQRVR AWLKHKNWRD
660 670 680 690 700
LQVAIGGWKP GKGSRANRIG SVLVGLPAET GLVYLGSVGS GLRDRDLDAL
710 720 730 740 750
AQRLEPLRMK RSPFTASIDD PDARDAVWVL PQVVGDVRYS SLRRGGHLRQ
760 770
PSWRGFRDDL LPGDLPGEAE IPWEGPDE
Length:778
Mass (Da):85,291
Last modified:July 13, 2010 - v1
Checksum:iCE6C63968BDE0339
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001966 Genomic DNA. Translation: ADG76855.1.
RefSeqiYP_003645194.1. NC_014158.1.

Genome annotation databases

EnsemblBacteriaiADG76855; ADG76855; Tpau_0201.
GeneIDi9154335.
KEGGitpr:Tpau_0201.
PATRICi38303657. VBITsuPau718_0202.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001966 Genomic DNA. Translation: ADG76855.1 .
RefSeqi YP_003645194.1. NC_014158.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG76855 ; ADG76855 ; Tpau_0201 .
GeneIDi 9154335.
KEGGi tpr:Tpau_0201.
PATRICi 38303657. VBITsuPau718_0202.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.

Enzyme and pathway databases

BioCyci TPAU521096:GI2W-204-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040Imported.

Entry informationi

Entry nameiD5UQM2_TSUPD
AccessioniPrimary (citable) accession number: D5UQM2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 29, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3