ID   D5UNB4_TSUPD            Unreviewed;       364 AA.
AC   D5UNB4;
DT   13-JUL-2010, integrated into UniProtKB/TrEMBL.
DT   13-JUL-2010, sequence version 1.
DT   27-MAR-2024, entry version 50.
DE   SubName: Full=DNA primase small subunit {ECO:0000313|EMBL:ADG80609.1};
GN   OrderedLocusNames=Tpau_4038 {ECO:0000313|EMBL:ADG80609.1};
OS   Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / CCUG 35730 / CIP
OS   100753 / JCM 10117 / KCTC 9821 / NBRC 16120 / NCIMB 702349 / NCTC 13040)
OS   (Corynebacterium paurometabolum).
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales; Tsukamurellaceae;
OC   Tsukamurella.
OX   NCBI_TaxID=521096 {ECO:0000313|EMBL:ADG80609.1, ECO:0000313|Proteomes:UP000001213};
RN   [1] {ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / CCUG 35730 / CIP 100753 / JCM 10117 /
RC   KCTC 9821 / NBRC 16120 / NCIMB 702349 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Mikhailova N., Munk A.C., Brettin T., Detter J.C., Tapia R., Han C.,
RA   Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA   Woyke T., Wu D., Jando M., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete chromosome of Tsukamurella paurometabola DSM 20162.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ADG80609.1, ECO:0000313|Proteomes:UP000001213}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 8368 / DSM 20162 / CCUG 35730 / CIP 100753 / JCM 10117 /
RC   KCTC 9821 / NBRC 16120 / NCIMB 702349 / NCTC 13040
RC   {ECO:0000313|Proteomes:UP000001213};
RX   PubMed=21886861;
RA   Munk A.C., Lapidus A., Lucas S., Nolan M., Tice H., Cheng J.F.,
RA   Del Rio T.G., Goodwin L., Pitluck S., Liolios K., Huntemann M., Ivanova N.,
RA   Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Tapia R.,
RA   Han C., Land M., Hauser L., Chang Y.J., Jeffries C.D., Brettin T.,
RA   Yasawong M., Brambilla E.M., Rohde M., Sikorski J., Goker M., Detter J.C.,
RA   Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P.,
RA   Kyrpides N.C., Klenk H.P.;
RT   "Complete genome sequence of Tsukamurella paurometabola type strain (no.
RT   33).";
RL   Stand. Genomic Sci. 4:342-351(2011).
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DR   EMBL; CP001966; ADG80609.1; -; Genomic_DNA.
DR   RefSeq; WP_013128600.1; NC_014158.1.
DR   AlphaFoldDB; D5UNB4; -.
DR   STRING; 521096.Tpau_4038; -.
DR   KEGG; tpr:Tpau_4038; -.
DR   eggNOG; COG3285; Bacteria.
DR   HOGENOM; CLU_008325_1_0_11; -.
DR   Proteomes; UP000001213; Chromosome.
DR   Gene3D; 3.90.920.10; DNA primase, PRIM domain; 1.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   PANTHER; PTHR42705:SF3; -; 1.
DR   PANTHER; PTHR42705; BIFUNCTIONAL NON-HOMOLOGOUS END JOINING PROTEIN LIGD; 1.
DR   Pfam; PF21686; LigD_Prim-Pol; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000001213}.
FT   DOMAIN          42..305
FT                   /note="DNA ligase D polymerase"
FT                   /evidence="ECO:0000259|Pfam:PF21686"
FT   REGION          331..364
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        347..364
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   364 AA;  40408 MW;  0CC8D5B2D518E454 CRC64;
     MAKAPAAEVI VPGGDGADRA VRVSSPDRII YPATDLTSAV SKLQVAQYFA AVGGPLLAAI
     GDRPTALERW PGGVHPGGRL AQGPQDKDAD GFYQKRMMKG APPYAQTVRI AFPSGRPADE
     LCPSEIAIPV WCAQMGTITF HPWPVRSADV DRPDELRIDL DPQPGTDFGD VVRVAAIARQ
     LFADLGMRAF CKTSGNRGVH VFVRIEPRWE FTDVRHAAIA FGRELEKRDD GVTTAWWKEE
     RGERIFVDYN QNCRDRTIAS AWSLRAVQGA TVSTPLTWEE LAEVTDPRMF NLFTVPERLA
     DGNPWAEMDE VAHDLTPLLQ KWEEHPVELN FPPDYPKMPG EPPRVQPSKK VAEHWDADGN
     RIDQ
//