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Protein
Submitted name:

DNA primase small subunit

Gene

Tpau_4038

Organism
Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA primase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciTPAU521096:GI2W-4081-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA primase small subunitImported
Gene namesi
Ordered Locus Names:Tpau_4038Imported
OrganismiTsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum)Imported
Taxonomic identifieri521096 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeTsukamurellaceaeTsukamurella
ProteomesiUP000001213: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5UNB4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKAPAAEVI VPGGDGADRA VRVSSPDRII YPATDLTSAV SKLQVAQYFA
60 70 80 90 100
AVGGPLLAAI GDRPTALERW PGGVHPGGRL AQGPQDKDAD GFYQKRMMKG
110 120 130 140 150
APPYAQTVRI AFPSGRPADE LCPSEIAIPV WCAQMGTITF HPWPVRSADV
160 170 180 190 200
DRPDELRIDL DPQPGTDFGD VVRVAAIARQ LFADLGMRAF CKTSGNRGVH
210 220 230 240 250
VFVRIEPRWE FTDVRHAAIA FGRELEKRDD GVTTAWWKEE RGERIFVDYN
260 270 280 290 300
QNCRDRTIAS AWSLRAVQGA TVSTPLTWEE LAEVTDPRMF NLFTVPERLA
310 320 330 340 350
DGNPWAEMDE VAHDLTPLLQ KWEEHPVELN FPPDYPKMPG EPPRVQPSKK
360
VAEHWDADGN RIDQ
Length:364
Mass (Da):40,408
Last modified:July 13, 2010 - v1
Checksum:i0CC8D5B2D518E454
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001966 Genomic DNA. Translation: ADG80609.1.
RefSeqiWP_013128600.1. NC_014158.1.
YP_003648948.1. NC_014158.1.

Genome annotation databases

EnsemblBacteriaiADG80609; ADG80609; Tpau_4038.
GeneIDi9158222.
KEGGitpr:Tpau_4038.
PATRICi38311445. VBITsuPau718_4048.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001966 Genomic DNA. Translation: ADG80609.1.
RefSeqiWP_013128600.1. NC_014158.1.
YP_003648948.1. NC_014158.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG80609; ADG80609; Tpau_4038.
GeneIDi9158222.
KEGGitpr:Tpau_4038.
PATRICi38311445. VBITsuPau718_4048.

Phylogenomic databases

HOGENOMiHOG000244654.

Enzyme and pathway databases

BioCyciTPAU521096:GI2W-4081-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040Imported.

Entry informationi

Entry nameiD5UNB4_TSUPD
AccessioniPrimary (citable) accession number: D5UNB4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: March 4, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.