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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Cfla_0584

Organism
Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciCFLA446466:GHDJ-592-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Cfla_0584Imported
OrganismiCellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134)Imported
Taxonomic identifieri446466 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesCellulomonadaceaeCellulomonas
ProteomesiUP000000849 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi446466.Cfla_0584.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

D5UIJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQTPAVELD VHGRTVRVSS PDRVVFPERG LTKLDVVEYF LAVGDGILGA
60 70 80 90 100
LLHRPTTLER WPKGVFEGAR MSTRQDSSGD AFYQKRVPQG APGYVETARI
110 120 130 140 150
AFPSGRTADE VAPTELAVVA WAANLGTLTF HPWPVVRDDV DAPDQVRIDL
160 170 180 190 200
DPQPGTDFAD AARVAPHVRE LLAEHGLEGH PKTSGGRGLH VFVPIEPRWS
210 220 230 240 250
FTDARRATIA FGRELERRLP GQVTMKWWKE ERGVKIFVDY NQMARDRTIA
260 270 280 290 300
SAYSIRSNPR ATVSAPLTWD EVGDVHPDDF DVLTMPARFA AVGDLHAPLV
310 320 330 340 350
AHAAPRHGLD SLLELADRQE HEDGHGDLPY PPEYPKMPGE PKRVQPSKDR

DRPR
Length:354
Mass (Da):39,304
Last modified:July 13, 2010 - v1
Checksum:i8CD67198A36A7E3F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001964 Genomic DNA. Translation: ADG73496.1.
RefSeqiWP_013115830.1. NC_014151.1.
YP_003635695.1. NC_014151.1.

Genome annotation databases

EnsemblBacteriaiADG73496; ADG73496; Cfla_0584.
KEGGicfl:Cfla_0584.
PATRICi38149119. VBICelFla99035_0592.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001964 Genomic DNA. Translation: ADG73496.1.
RefSeqiWP_013115830.1. NC_014151.1.
YP_003635695.1. NC_014151.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi446466.Cfla_0584.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG73496; ADG73496; Cfla_0584.
KEGGicfl:Cfla_0584.
PATRICi38149119. VBICelFla99035_0592.

Phylogenomic databases

HOGENOMiHOG000244654.
OMAiFHPWPVR.

Enzyme and pathway databases

BioCyciCFLA446466:GHDJ-592-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134Imported.

Entry informationi

Entry nameiD5UIJ7_CELFN
AccessioniPrimary (citable) accession number: D5UIJ7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 24, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.