D5UBQ7 (D5UBQ7_CELFN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADG74152.1

Gene names

Ordered Locus Names:

Cfla_1252

Organism

Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) [Complete proteome] [HAMAP]

Taxonomic identifier

446466 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Cellulomonadaceae › Cellulomonas › Cellulomonas flavigena

Protein attributes

Sequence length	348 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADG74152.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5UBQ7 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: D9631523B6BCD32D	FASTA	348	39,025
	10 20 30 40 50 60 MPPVAPMLAK SVKEIPDTGH VEPKWDGFRT IVFRDEDDVE LGSRNGKPMT RYFPELVEAL 70 80 90 100 110 120 KENLPERCVL DGEIVVVTGD RLDFDALQQR IHPAASRVKL LAGQTPASFV AFDLLALGDD 130 140 150 160 170 180 DLTGRPFSER RARLVEALAG ARPPVHVTRA TGDMAEAQRW FTQFEGAGLD GVVAKPLDAP 190 200 210 220 230 240 YQPDKRAMFK IKHERTADCV VAGFRWHKTG DVVGSLLLGL WNDEGRLQHV GVSASFPMAR 250 260 270 280 290 300 RRTLLDDLAP YRDVDLADHP WGAWADQQAH ADNRLPGAVS RWNATKDLSF VPLRPELVVE 310 320 330 340 VAYDHMEGDR FRHTAQFRRW RTDRDPRTCT YEQLDEPVGY DLADVLGG

References

[1]

"Complete genome sequence of Cellulomonas flavigena type strain (134)." Abt B., Foster B., Lapidus A., Clum A., Sun H., Pukall R., Lucas S., Glavina Del Rio T., Nolan M., Tice H., Cheng J., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A., Goodwin L. , Chen A., Palaniappan K., Land M., Hause L., Chang Y., Jeffries C., Rohde M., Goker M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H. Stand. Genomic Sci. 3:15-25(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001964 Genomic DNA. Translation: ADG74152.1.
RefSeq	YP_003636351.1. NC_014151.1.
3D structure databases
ProteinModelPortal	D5UBQ7.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG74152; ADG74152; Cfla_1252.
GeneID	9145131.
KEGG	cfl:Cfla_1252.
PATRIC	38150459. VBICelFla99035_1253.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000222508.
KO	K01971.
Enzyme and pathway databases
BioCyc	CFLA446466:GHDJ-1269-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5UBQ7_CELFN

Accession

Primary (citable) accession number: D5UBQ7

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)