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D5U0C7 (D5U0C7_THEAM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glyceraldehyde-3-phosphate dehydrogenase HAMAP-Rule MF_00559

Short name=GAPDH HAMAP-Rule MF_00559
EC=1.2.1.59 HAMAP-Rule MF_00559
Alternative name(s):
NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase HAMAP-Rule MF_00559
Gene names
Name:gap HAMAP-Rule MF_00559
Ordered Locus Names:Tagg_0301 EMBL ADG90577.1
OrganismThermosphaera aggregans (strain DSM 11486 / M11TL) [Complete proteome] [HAMAP] EMBL ADG90577.1
Taxonomic identifier633148 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiDesulfurococcalesDesulfurococcaceaeThermosphaera

Protein attributes

Sequence length343 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding11 – 122NAD By similarity HAMAP-Rule MF_00559
Region138 – 1403Glyceraldehyde 3-phosphate binding By similarity HAMAP-Rule MF_00559
Region193 – 1942Glyceraldehyde 3-phosphate binding By similarity HAMAP-Rule MF_00559

Sites

Active site1391Nucleophile By similarity PIRSR PIRSR000149-1 HAMAP-Rule MF_00559
Binding site1091NAD; via amide nitrogen By similarity HAMAP-Rule MF_00559
Binding site1671NAD By similarity HAMAP-Rule MF_00559
Binding site3011NAD; via carbonyl oxygen By similarity HAMAP-Rule MF_00559

Sequences

Sequence LengthMass (Da)Tools
D5U0C7 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 356D92B0171D6F33

FASTA34337,975
        10         20         30         40         50         60 
MVKVGVNGYG TIGKRVADAI LKNPRFQLVG IVKYNPDYSS KIAFKKGINI YVPQDKWRDF 

        70         80         90        100        110        120 
ESTGITPKGT IQEFLEESSI IIDASPNGKG AANLSLYKGA GKPAIFQGGE KPEVAELSYS 

       130        140        150        160        170        180 
TYCNYDEAFG RKYLRVVSCN TTGILRVLCA LHREFNVKRA RVLVIRRGAD PKEDARGPIN 

       190        200        210        220        230        240 
SIKLESFEDV SHHGKDAMLV LPSVKIISQA VVVPTTLMHV QYLDIDVASP VTRSQVIEAL 

       250        260        270        280        290        300 
SKHARILLVN PKKTGIDSTS KLIEAARDFL RSRNDIYENI VFENTIIVSD NNISLIQAIH 

       310        320        330        340 
QESIVVPENM DALYAIANIR LPFEKVVEET DRLLGVGGLK DVF 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001939 Genomic DNA. Translation: ADG90577.1.
RefSeqYP_003649529.1. NC_014160.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG90577; ADG90577; Tagg_0301.
GeneID9165314.
KEGGtag:Tagg_0301.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000223361.
KOK00150.
OMAVTVPSHH.

Enzyme and pathway databases

BioCycTAGG633148:GHBI-310-MONOMER.
UniPathwayUPA00109; UER00184.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
HAMAPMF_00559. G3P_dehdrog_arch.
InterProIPR020831. GlycerAld/Erythrose_P_DH.
IPR020830. GlycerAld_3-P_DH_AS.
IPR020829. GlycerAld_3-P_DH_cat.
IPR020828. GlycerAld_3-P_DH_NAD(P)-bd.
IPR006436. Glyceraldehyde-3-P_DH_2_arc.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamPF02800. Gp_dh_C. 1 hit.
PF00044. Gp_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000149. GAP_DH. 1 hit.
SMARTSM00846. Gp_dh_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR01546. GAPDH-II_archae. 1 hit.
PROSITEPS00071. GAPDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5U0C7_THEAM
AccessionPrimary (citable) accession number: D5U0C7
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 11, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)