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Protein
Submitted name:

Triple helix repeat-containing collagen

Gene

BMB171_C3160

Organism
Bacillus thuringiensis (strain BMB171)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi132Calcium 1UniRule annotation1
Metal bindingi189Calcium 2UniRule annotation1
Metal bindingi211Calcium 2; via carbonyl oxygenUniRule annotation1
Metal bindingi213Calcium 2UniRule annotation1
Metal bindingi224Calcium 1UniRule annotation1
Metal bindingi230Calcium 1UniRule annotation1
Metal bindingi232Calcium 2UniRule annotation1
Active sitei261NucleophileUniRule annotation1
Metal bindingi265Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei291Proton donorUniRule annotation1
Metal bindingi330Calcium 3; via carbonyl oxygenUniRule annotation1
Metal bindingi437Calcium 3UniRule annotation1
Metal bindingi460Calcium 3UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Triple helix repeat-containing collagenImported
Gene namesi
Ordered Locus Names:BMB171_C3160Imported
OrganismiBacillus thuringiensis (strain BMB171)Imported
Taxonomic identifieri714359 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
Proteomesi
  • UP000001658 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 27Sequence analysisAdd BLAST27
ChainiPRO_500307718128 – 513Sequence analysisAdd BLAST486

Structurei

3D structure databases

ProteinModelPortaliD5TT57.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 421AamyInterPro annotationAdd BLAST389

Keywords - Domaini

CollagenImported, SignalSequence analysis

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiEYWSGDI.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

D5TT57-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKRITIVGL SVVMFLPSIY EGSKAYADTV NNGTLMQYFE WYAPNDGNHW
60 70 80 90 100
NRLRTDVENL AEKGITSVWI PPAYKGTTQN DVGYGAYDLY DLGEFNQKGT
110 120 130 140 150
VRTKYGTKAQ LKSAIDALHK KNIDVYGDVV MNHKGGADYT ETVTAVEVDP
160 170 180 190 200
SNRNVEVSGD YEISAWTGFN FPGRGDSYSN FKWKWYHFDG TDWDEGRKLN
210 220 230 240 250
RIYKFRGIGK AWDWEVSSEN GNYDYLMYAD LDFDHPDVAN EMKKWGTWYA
260 270 280 290 300
NELNLDGFRL DAVKHIDHEY LRDWVNHVRQ QTGKEMFTVA EYWQNDIQTL
310 320 330 340 350
NNYLAKVNYN QSVFDAPLHY NFHYASTGNG NYDMRNILKG TVVANHPTLA
360 370 380 390 400
VTLVENHDSQ PGQSLESVVS PWFKPLAYAF ILTRAEGYPS VFYGDYYGTK
410 420 430 440 450
GNSNYEIPAL KDKIDPILTA RKNFAYGTQR DYFDHPDVIG WTREGDSVHA
460 470 480 490 500
NSGLATLISD GPGGAKWMDV GKNNAGEVWY DITGNQTNTV TINKDGWGQF
510
QVSGGSVSIY VQQ
Length:513
Mass (Da):58,306
Last modified:July 13, 2010 - v1
Checksum:i05C4611C4BFF9FF6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001903 Genomic DNA. Translation: ADH07970.1.
RefSeqiWP_000476408.1. NC_014171.1.

Genome annotation databases

EnsemblBacteriaiADH07970; ADH07970; BMB171_C3160.
KEGGibtb:BMB171_C3160.
PATRICi38133219. VBIBacThu148000_3394.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001903 Genomic DNA. Translation: ADH07970.1.
RefSeqiWP_000476408.1. NC_014171.1.

3D structure databases

ProteinModelPortaliD5TT57.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADH07970; ADH07970; BMB171_C3160.
KEGGibtb:BMB171_C3160.
PATRICi38133219. VBIBacThu148000_3394.

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiEYWSGDI.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD5TT57_BACT1
AccessioniPrimary (citable) accession number: D5TT57
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: February 15, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.