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D5TLF4 (D5TLF4_BACT1) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase EMBL ADH05044.1
Gene names
Name:dal1 EMBL ADH05044.1
Ordered Locus Names:BMB171_C0226 EMBL ADH05044.1
OrganismBacillus thuringiensis (strain BMB171) [Complete proteome] [HAMAP] EMBL ADH05044.1
Taxonomic identifier714359 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus › Bacillus cereus group ›

Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5TLF4 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: B4A74AE1C39FC236

FASTA38943,773
        10         20         30         40         50         60 
MEEAPFYRDT WVEVDLDAIY NNVTHIKEFI PSNVEIFAVV KANAYGHDYI PVAKTALEAG 

        70         80         90        100        110        120 
ATRLAVAFLD EALVLRRAGI TEPILVLGPS PPRDVNVAAE NDVALTVFQK EWVDEAIKLW 

       130        140        150        160        170        180 
DGSSVMKFHI NFDSGMGRIG IRERKELKEF LKSLEGAPFL ELEGVYTHFA TADEVETSYF 

       190        200        210        220        230        240 
DKQYNTFLEQ LSWLKEFGVD PKFVHTANSA ATLRFQGITF NAVRIGIAMY GLSPSVEIRP 

       250        260        270        280        290        300 
FLPFELEPAL SLHTKVAHIK QVIKGDGISY NVTYRTKTEE WIATVAIGYA DGWLRRLQGF 

       310        320        330        340        350        360 
EVLINGKRVP IVGRVTMDQF MIHLPCEVPL GTKVTLIGRQ GDEYISATEV AEYSGTINYE 

       370        380 
IIATISFRVP RIFIRNGKVV EIINYLNNI

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References

[1]"Complete genome sequence of Bacillus thuringiensis mutant strain BMB171."
He J., Shao X., Zheng H., Li M., Wang J., Zhang Q., Li L., Liu Z., Sun M., Wang S., Yu Z.
J. Bacteriol. 192:4074-4075(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BMB171 EMBL ADH05044.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001903 Genomic DNA. Translation: ADH05044.1.
RefSeqYP_003662764.1. NC_014171.1.

3D structure databases

ProteinModelPortalD5TLF4.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADH05044; ADH05044; BMB171_C0226.
GeneID9191267.
KEGGbtb:BMB171_C0226.
PATRIC38126743. VBIBacThu148000_0242.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031444.
KOK01775.

Enzyme and pathway databases

BioCycBTHU714359:GJBQ-264-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5TLF4_BACT1
AccessionPrimary (citable) accession number: D5TLF4
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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