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D5THC9 (D5THC9_BIFAV) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length490 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
D5THC9 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: 2900FC211E9B7B32

FASTA49054,885
        10         20         30         40         50         60 
MLQCFEWYLP ESHNLWRWLS SQAPSVAHAG FTTAWLPPAY KGQAGDSDVG YGVYDMYDLG 

        70         80         90        100        110        120 
EFDAKGSVPT KYGSRMEYLQ AIRAMQGNGV RVFADIVFNH RMGADGTEPV RTHEVNVDDR 

       130        140        150        160        170        180 
TRSDSTVVER TLNTVYDFPE RGGVYSTFKW NWSDFTGTDY TTDDGTTGIM RFDGKQWSDN 

       190        200        210        220        230        240 
VSHERGNFDY IMGDDVDVNE PEVARELTDW GIWYTTTTGV DGFRLDAVKS IDAGFFAPWL 

       250        260        270        280        290        300 
RTMQRYGNHP GIAVGEYWSG DASELTSYLH DCNHCMMLFD VALHFRFEQA SKNPEGFDLR 

       310        320        330        340        350        360 
GLAADTLYER EPTYACTFVD NHDTQPGQAL ESWVQPWFKP LAYACILLRD NVLPCVFFGD 

       370        380        390        400        410        420 
YYGVPHDLIP PMRFLPHMVW IRAHLLGDQV EAQPGDTAHS LCWVVEGNHP VCVVLNTGSS 

       430        440        450        460        470        480 
EVHRQVRNAA LASHTLIDVC HPDAPATTDT QGQGMMRCPP RSCAIYIDAD DYGVMLEALS 

       490 
GTPAAGTVCA 

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References

[1]"Complete genome sequence of probiotic Bifidobacterium animalis subsp. lactis strain V9."
Sun Z., Chen X., Wang J., Gao P., Zhou Z., Ren Y., Sun T., Wang L., Meng H., Chen W., Zhang H.
J. Bacteriol. 192:4080-4081(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: V9 EMBL ADG33505.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001892 Genomic DNA. Translation: ADG33505.1.
RefSeqYP_005581284.1. NC_017217.1.

3D structure databases

ProteinModelPortalD5THC9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADG33505; ADG33505; BalV_0917.
GeneID12171497.
KEGGblv:BalV_0917.
PATRIC42764225. VBIBifAni108068_0945.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000094847.
KOK01176.
OMARATKYGD.

Enzyme and pathway databases

BioCycBANI573236:GL92-954-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5THC9_BIFAV
AccessionPrimary (citable) accession number: D5THC9
Entry history
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)