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D5SZ58

- D5SZ58_PLAL2

UniProt

D5SZ58 - D5SZ58_PLAL2

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Protein
Submitted name:

Uncharacterized protein

Gene
Plim_4148
Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi58 – 581Copper; via tele nitrogenImported
Metal bindingi60 – 601Copper; via tele nitrogenImported
Metal bindingi65 – 651CopperImported
Metal bindingi67 – 671CopperImported
Metal bindingi101 – 1011Copper; via tele nitrogenImported

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

CopperImported, Metal-bindingImported

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-4216-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Plim_4148Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4H7LX-ray2.45A/B1-154[»]
ProteinModelPortaliD5SZ58.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000106005.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
InterProiIPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D5SZ58-1 [UniParc]FASTAAdd to Basket

« Hide

MTESTKDSPS AAMPQMISLS EIEAVACPCG WAQRAFGHDA GTSVSVHYTQ    50
ITKAARTHYH REHQEIYVVL DHAAHATIEL NGQSYPLTKL LAISIPPLVR 100
HRIVGEATII NIVSPPFDPA DEWFDSSDMN CDEMNADMNT ADTSSALPME 150
IHHV 154
Length:154
Mass (Da):16,925
Last modified:July 13, 2010 - v1
Checksum:iAEE30DDBA229B2C4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001744 Genomic DNA. Translation: ADG69959.1.
RefSeqiYP_003632158.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG69959; ADG69959; Plim_4148.
GeneIDi9140868.
KEGGiplm:Plim_4148.
PATRICi38245658. VBIPlaLim6916_5057.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001744 Genomic DNA. Translation: ADG69959.1 .
RefSeqi YP_003632158.1. NC_014148.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4H7L X-ray 2.45 A/B 1-154 [» ]
ProteinModelPortali D5SZ58.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG69959 ; ADG69959 ; Plim_4148 .
GeneIDi 9140868.
KEGGi plm:Plim_4148.
PATRICi 38245658. VBIPlaLim6916_5057.

Phylogenomic databases

HOGENOMi HOG000106005.

Enzyme and pathway databases

BioCyci PLIM521674:GKE7-4216-MONOMER.

Family and domain databases

Gene3Di 2.60.120.10. 1 hit.
InterProi IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view ]
SUPFAMi SSF51182. SSF51182. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290.
  2. "Crystal structure of Plim_4148 protein from Planctomyces limnophilus."
    Midwest Center for Structural Genomics (MCSG)
    Michalska K., Bigelow L., Bruno C.J.P., Moser C., Bearden J., Joachimiak A.
    Submitted (SEP-2012) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.45 ANGSTROMS) IN COMPLEX WITH COPPER.

Entry informationi

Entry nameiD5SZ58_PLAL2
AccessioniPrimary (citable) accession number: D5SZ58
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 11, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3