Uncharacterized protein precursor - Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)

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D5SZ58 (D5SZ58_PLAL2) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. History...

Clusters with 100%, 90%, 50% identity |

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ADG69959.1

Gene names

Ordered Locus Names:

Plim_4148 EMBL ADG69959.1

Organism

Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) [Complete proteome] [HAMAP] EMBL ADG69959.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Planctomyces ›

Protein attributes

Sequence length	154 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4H7L Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence

Length

Mass (Da)

Tools

D5SZ58 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: AEE30DDBA229B2C4
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154

16,925

        10         20         30         40         50         60 
MTESTKDSPS AAMPQMISLS EIEAVACPCG WAQRAFGHDA GTSVSVHYTQ ITKAARTHYH 

        70         80         90        100        110        120 
REHQEIYVVL DHAAHATIEL NGQSYPLTKL LAISIPPLVR HRIVGEATII NIVSPPFDPA 

       130        140        150 
DEWFDSSDMN CDEMNADMNT ADTSSALPME IHHV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Planctomyces limnophilus type strain (Mu 290)." Labutti K., Sikorski J., Schneider S., Nolan M., Lucas S., Glavina Del Rio T., Tice H., Cheng J.F., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Land M. Lapidus A. Stand. Genomic Sci. 3:47-56(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290.
[2]	"Crystal structure of Plim_4148 protein from Planctomyces limnophilus." Michalska K., Bigelow L., Bruno C.J.P., Moser C., Bearden J., Joachimiak A., Midwest Center for Structural Genomics (MCSG). Submitted (SEP-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.45 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP001744 Genomic DNA. Translation: ADG69959.1.

RefSeq

YP_003632158.1. NC_014148.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4H7L	X-ray	2.45	A/B	1-154	[»]

ProteinModelPortal

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

ADG69959; ADG69959; Plim_4148.

GeneID

KEGG

PATRIC

38245658. VBIPlaLim6916_5057.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

Family and domain databases

Gene3D

2.60.120.10. 1 hit.

InterPro

IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
[Graphical view]

SUPFAM

SSF51182. RmlC_like_cupin. 1 hit.

ProtoNet

Entry information

Entry name

D5SZ58_PLAL2

Accession

Primary (citable) accession number: D5SZ58

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info