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D5SZ58

- D5SZ58_PLAL2

UniProt

D5SZ58 - D5SZ58_PLAL2

Protein
Submitted name:

Uncharacterized protein

Gene

Plim_4148

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 25 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi58 – 581Copper; via tele nitrogenImported
    Metal bindingi60 – 601Copper; via tele nitrogenImported
    Metal bindingi65 – 651CopperImported
    Metal bindingi67 – 671CopperImported
    Metal bindingi101 – 1011Copper; via tele nitrogenImported

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW

    Keywords - Ligandi

    CopperImported, Metal-bindingImported

    Enzyme and pathway databases

    BioCyciPLIM521674:GKE7-4216-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Ordered Locus Names:Plim_4148Imported
    OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
    Taxonomic identifieri521674 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
    ProteomesiUP000002220: Chromosome

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4H7LX-ray2.45A/B1-154[»]
    ProteinModelPortaliD5SZ58.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000106005.

    Family and domain databases

    Gene3Di2.60.120.10. 1 hit.
    InterProiIPR014710. RmlC-like_jellyroll.
    IPR011051. RmlC_Cupin.
    [Graphical view]
    SUPFAMiSSF51182. SSF51182. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    D5SZ58-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTESTKDSPS AAMPQMISLS EIEAVACPCG WAQRAFGHDA GTSVSVHYTQ    50
    ITKAARTHYH REHQEIYVVL DHAAHATIEL NGQSYPLTKL LAISIPPLVR 100
    HRIVGEATII NIVSPPFDPA DEWFDSSDMN CDEMNADMNT ADTSSALPME 150
    IHHV 154
    Length:154
    Mass (Da):16,925
    Last modified:July 13, 2010 - v1
    Checksum:iAEE30DDBA229B2C4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001744 Genomic DNA. Translation: ADG69959.1.
    RefSeqiYP_003632158.1. NC_014148.1.

    Genome annotation databases

    EnsemblBacteriaiADG69959; ADG69959; Plim_4148.
    GeneIDi9140868.
    KEGGiplm:Plim_4148.
    PATRICi38245658. VBIPlaLim6916_5057.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001744 Genomic DNA. Translation: ADG69959.1 .
    RefSeqi YP_003632158.1. NC_014148.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4H7L X-ray 2.45 A/B 1-154 [» ]
    ProteinModelPortali D5SZ58.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADG69959 ; ADG69959 ; Plim_4148 .
    GeneIDi 9140868.
    KEGGi plm:Plim_4148.
    PATRICi 38245658. VBIPlaLim6916_5057.

    Phylogenomic databases

    HOGENOMi HOG000106005.

    Enzyme and pathway databases

    BioCyci PLIM521674:GKE7-4216-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.10. 1 hit.
    InterProi IPR014710. RmlC-like_jellyroll.
    IPR011051. RmlC_Cupin.
    [Graphical view ]
    SUPFAMi SSF51182. SSF51182. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.
    2. "Crystal structure of Plim_4148 protein from Planctomyces limnophilus."
      Midwest Center for Structural Genomics (MCSG)
      Michalska K., Bigelow L., Bruno C.J.P., Moser C., Bearden J., Joachimiak A.
      Submitted (SEP-2012) to the PDB data bank
      Cited for: X-RAY CRYSTALLOGRAPHY (2.45 ANGSTROMS) IN COMPLEX WITH COPPER.

    Entry informationi

    Entry nameiD5SZ58_PLAL2
    AccessioniPrimary (citable) accession number: D5SZ58
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 25 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3