D5SWL9 (D5SWL9_PLAL2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Peptidase T EMBL ADG69612.1

Gene names

Ordered Locus Names:

Plim_3800 EMBL ADG69612.1

Organism

Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) [Complete proteome] [HAMAP] EMBL ADG69612.1

Taxonomic identifier

521674 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Planctomyces › Planctomyces limnophilus

Protein attributes

Sequence length	422 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	Release of the N-terminal residue from a tripeptide. SAAS SAAS010161
Cofactor	Binds 2 zinc ions per subunit By similarity. SAAS SAAS010161
Subcellular location	Cytoplasm By similarity SAAS SAAS010161.

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS010161
Ligand	Metal-binding SAAS SAAS010161 Zinc SAAS SAAS010161
Molecular function	Aminopeptidase SAAS SAAS010161 Hydrolase Metalloprotease SAAS SAAS010161 Protease
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	peptide metabolic process Inferred from electronic annotation. Source: InterPro proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	metallopeptidase activity Inferred from electronic annotation. Source: UniProtKB-KW tripeptide aminopeptidase activity Inferred from electronic annotation. Source: InterPro zinc ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5SWL9 [UniParc]. Last modified July 13, 2010. Version 1. Checksum: 5E49539C6BAD8CC0	FASTA	422	45,302
	10 20 30 40 50 60 MTPATCHFRD ELLERFLRYV RIETTADETS QTVPSTMSQL DLSRLLFAEC EAMGLADCSM 70 80 90 100 110 120 SPHGVVMATV PATIPDGAGG KKLPAIAWIA HVDTSPEYSG KNVQPIVHRH YDGRDIHLPA 130 140 150 160 170 180 DPRQIHRPSE QPELAAAVGH TIITTDGSTL LGGDDKGGVA VIMQAARELM RSDLPHGPIR 190 200 210 220 230 240 LCFTCDEEIG RGTDHLDLAA LDCICGYTLD GGGQGVVDNE TFSADQAVIT VKGVNTHPSV 250 260 270 280 290 300 GKGVMVNAIR ILSELIARLP KLAVSPETTD GRDGFIHPYH LEGGVAQASA RLILRDFETS 310 320 330 340 350 360 GLAAQARILQ SIAESLKVEY PRATIEIAIH PQYRNMRDGL AKEPRAVPKA LAAMKAAGIE 370 380 390 400 410 420 PILSIIRGGT DGSLLTAKGL PCPNLSTGQH NPHSPLEWAS LDEMEVAVKV LIQLAIEWGK LE

References

[1]

"Complete genome sequence of Planctomyces limnophilus type strain (Mu 290)." Labutti K., Sikorski J., Schneider S., Nolan M., Lucas S., Glavina Del Rio T., Tice H., Cheng J.F., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Land M. , Hauser L., Chang Y.J., Jeffries C.D., Tindall B.J., Rohde M., Goker M., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A. Stand. Genomic Sci. 3:47-56(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001744 Genomic DNA. Translation: ADG69612.1.
RefSeq	YP_003631811.1. NC_014148.1.
3D structure databases
ProteinModelPortal	D5SWL9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADG69612; ADG69612; Plim_3800.
GeneID	9140518.
KEGG	plm:Plim_3800.
PATRIC	38244816. VBIPlaLim6916_4638.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000032390.
KO	K01258.
OMA	YVYATIP.
Enzyme and pathway databases
BioCyc	PLIM521674:GKE7-3866-MONOMER.
Family and domain databases
Gene3D	3.30.70.360. 1 hit.
InterPro	IPR002933. Peptidase_M20. IPR011650. Peptidase_M20_dimer. IPR010161. Peptidase_M20B. [Graphical view]
Pfam	PF07687. M20_dimer. 1 hit. PF01546. Peptidase_M20. 1 hit. [Graphical view]
PIRSF	PIRSF037215. Peptidase_M20B. 1 hit.
SUPFAM	SSF55031. Peptidase_M20_dimer. 1 hit.
TIGRFAMs	TIGR01882. peptidase-T. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5SWL9_PLAL2

Accession

Primary (citable) accession number: D5SWL9

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 29, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)