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D5SW38

- D5SW38_PLAL2

UniProt

D5SW38 - D5SW38_PLAL2

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Protein
Submitted name: Phosphate binding protein
Gene
Plim_1490
Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei95 – 951Sulfate 1Imported
Binding sitei113 – 1131Sulfate 1Imported
Binding sitei191 – 1911Sulfate 2Imported
Binding sitei219 – 2191Sulfate 2Imported
Binding sitei222 – 2221Sulfate 3Imported
Binding sitei242 – 2421Sulfate 3Imported
Binding sitei317 – 3171Sulfate 3Imported

GO - Biological processi

  1. transport Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1534-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphate binding proteinImported
Gene namesi
Ordered Locus Names:Plim_1490Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PredictedImported
Add
BLAST
Chaini27 – 338312 PredictedImported
PRO_5000587219Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JWOX-ray1.60A1-338[»]
ProteinModelPortaliD5SW38.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni65 – 662Sulfate 1 bindingImported

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000074254.
KOiK02040.
OMAiEIMEVRI.

Family and domain databases

InterProiIPR024370. PBP_domain.
IPR011862. Phos-bd.
[Graphical view]
PfamiPF12727. PBP_like. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02136. ptsS_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D5SW38-1 [UniParc]FASTAAdd to Basket

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MPFLRPRYVL VLIALFGTVC GSLSGCVQKK SADQAASTSE KTNSSTEGMN    50
AATPSISGTI AVDGSSTVFP ISQAVAEEFE GKFPEVKLTV AMSGTGGGFK 100
KFIAEEIDVT GASRPITEKE AAECKAKGID YVEFQVAIDG LTVVINPANT 150
FAECMTVAEL NKIWAADSKV SKWSEVREGW PDEPIQLFGA DTASGTFDYF 200
TEVINGKAKS SRSDYTANSN DNILVQGVVD SKGALGYFGY AYFAENASKL 250
KAVKISDGKK AVCVEPTPAT IESGEYTPLS RPLFIYTTKA KLKRPEVAEF 300
IKFLLSEKGD QLVEEVKYIK VPKSVKETMQ QRLADALK 338
Length:338
Mass (Da):36,422
Last modified:July 13, 2010 - v1
Checksum:i9501AA306FDA1AC0
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001744 Genomic DNA. Translation: ADG67323.1.
RefSeqiYP_003629522.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG67323; ADG67323; Plim_1490.
GeneIDi9138187.
KEGGiplm:Plim_1490.
PATRICi38239096. VBIPlaLim6916_1797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001744 Genomic DNA. Translation: ADG67323.1 .
RefSeqi YP_003629522.1. NC_014148.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
4JWO X-ray 1.60 A 1-338 [» ]
ProteinModelPortali D5SW38.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG67323 ; ADG67323 ; Plim_1490 .
GeneIDi 9138187.
KEGGi plm:Plim_1490.
PATRICi 38239096. VBIPlaLim6916_1797.

Phylogenomic databases

HOGENOMi HOG000074254.
KOi K02040.
OMAi EIMEVRI.

Enzyme and pathway databases

BioCyci PLIM521674:GKE7-1534-MONOMER.

Family and domain databases

InterProi IPR024370. PBP_domain.
IPR011862. Phos-bd.
[Graphical view ]
Pfami PF12727. PBP_like. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02136. ptsS_2. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290.
  2. "The crystal structure of a possible phosphate binding protein from Planctomyces limnophilus DSM 3776."
    Tan K., Gu M., Endres M., Joachimiak A.
    Submitted (MAR-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS).

Entry informationi

Entry nameiD5SW38_PLAL2
AccessioniPrimary (citable) accession number: D5SW38
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: September 3, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureImported, Complete proteome

External Data

Dasty 3