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Protein
Submitted name:

Phosphate binding protein

Gene

Plim_1490

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. transport Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1534-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphate binding proteinImported
Gene namesi
Ordered Locus Names:Plim_1490Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626 PotentialImportedAdd
BLAST
Chaini27 – 338312 PotentialImportedPRO_5000587219Add
BLAST

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JWOX-ray1.60A1-338[»]
ProteinModelPortaliD5SW38.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000074254.
KOiK02040.
OMAiKNDWIKS.

Family and domain databases

InterProiIPR024370. PBP_domain.
IPR011862. Phos-bd.
[Graphical view]
PfamiPF12727. PBP_like. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02136. ptsS_2. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D5SW38-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPFLRPRYVL VLIALFGTVC GSLSGCVQKK SADQAASTSE KTNSSTEGMN
60 70 80 90 100
AATPSISGTI AVDGSSTVFP ISQAVAEEFE GKFPEVKLTV AMSGTGGGFK
110 120 130 140 150
KFIAEEIDVT GASRPITEKE AAECKAKGID YVEFQVAIDG LTVVINPANT
160 170 180 190 200
FAECMTVAEL NKIWAADSKV SKWSEVREGW PDEPIQLFGA DTASGTFDYF
210 220 230 240 250
TEVINGKAKS SRSDYTANSN DNILVQGVVD SKGALGYFGY AYFAENASKL
260 270 280 290 300
KAVKISDGKK AVCVEPTPAT IESGEYTPLS RPLFIYTTKA KLKRPEVAEF
310 320 330
IKFLLSEKGD QLVEEVKYIK VPKSVKETMQ QRLADALK
Length:338
Mass (Da):36,422
Last modified:July 13, 2010 - v1
Checksum:i9501AA306FDA1AC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67323.1.
RefSeqiWP_013109754.1. NC_014148.1.
YP_003629522.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG67323; ADG67323; Plim_1490.
GeneIDi9138187.
KEGGiplm:Plim_1490.
PATRICi38239096. VBIPlaLim6916_1797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67323.1.
RefSeqiWP_013109754.1. NC_014148.1.
YP_003629522.1. NC_014148.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4JWOX-ray1.60A1-338[»]
ProteinModelPortaliD5SW38.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG67323; ADG67323; Plim_1490.
GeneIDi9138187.
KEGGiplm:Plim_1490.
PATRICi38239096. VBIPlaLim6916_1797.

Phylogenomic databases

HOGENOMiHOG000074254.
KOiK02040.
OMAiKNDWIKS.

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1534-MONOMER.

Family and domain databases

InterProiIPR024370. PBP_domain.
IPR011862. Phos-bd.
[Graphical view]
PfamiPF12727. PBP_like. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02136. ptsS_2. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.
  2. "The crystal structure of a possible phosphate binding protein from Planctomyces limnophilus DSM 3776."
    Tan K., Gu M., Endres M., Joachimiak A.
    Submitted (MAR-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (1.60 ANGSTROMS), ACTIVE SITE.

Entry informationi

Entry nameiD5SW38_PLAL2
AccessioniPrimary (citable) accession number: D5SW38
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: January 7, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.