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D5SVD7

- D5SVD7_PLAL2

UniProt

D5SVD7 - D5SVD7_PLAL2

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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

Plim_1373

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1415-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Plim_1373Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5SVD7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiYSENLAD.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF07883. Cupin_2. 1 hit.
PF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

D5SVD7-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MFRVLYQLNC PKNSAEAVAR DIALEQTVEV PESLITDEVI WQNFAGQVVS
60 70 80 90 100
VRSVSEHVQV ASIEYHAHLA SGHLAQLMNL LFGNVSLKPG VRLLDVEFPE
110 120 130 140 150
SFLSGLAGPK LGIEGLRSAC GVWERPLLAT AIKPKGSSVA QLAQIAGEFA
160 170 180 190 200
AGGGDLVKDD HNLAESTFDA FRTRVEACQQ AVLSKTPPGQ KCLYFPNLSG
210 220 230 240 250
TLRDLERQAA FCVESGIRGV LVAPMIAGLE TIRHLSESFP LAILAHPTMS
260 270 280 290 300
GSFLQEGQGL SHAFWLSTMM RLCGCDGTVF PNTGGRFSFS QADCLSIADA
310 320 330 340 350
ARKPLGRLKS CFPAPAGGMS YASLPGMARD YGPDTIFLVG GGLLGYSENL
360 370 380 390 400
ADSTAAFRSR IEELFLTNQA SQNSNPDPRG QYVSSCELPA AYPPGAQNSG
410 420 430 440 450
IAEYAQGNEK SGISSLDSAN SIVTQLLKFL PGYRWEKREV SVYKPNAGLP
460 470 480 490 500
FAHVDRQELI GKFGESTAFD VRYFELAPGG YSSREKHFHT HVVIPVRGQG
510 520 530 540 550
QLECQGQIFP LQHLDIAYVP PLAVHQLSNP TDEPFGFLCI VDHDRDAPMA

P
Length:551
Mass (Da):59,501
Last modified:July 13, 2010 - v1
Checksum:iD9D5E0D4338818D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67207.1.
RefSeqiYP_003629406.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG67207; ADG67207; Plim_1373.
GeneIDi9138068.
KEGGiplm:Plim_1373.
PATRICi38238804. VBIPlaLim6916_1653.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67207.1 .
RefSeqi YP_003629406.1. NC_014148.1.

3D structure databases

ProteinModelPortali D5SVD7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADG67207 ; ADG67207 ; Plim_1373 .
GeneIDi 9138068.
KEGGi plm:Plim_1373.
PATRICi 38238804. VBIPlaLim6916_1653.

Phylogenomic databases

KOi K01601.
OMAi YSENLAD.

Enzyme and pathway databases

BioCyci PLIM521674:GKE7-1415-MONOMER.

Family and domain databases

Gene3Di 2.60.120.10. 1 hit.
3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProi IPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view ]
Pfami PF07883. Cupin_2. 1 hit.
PF00016. RuBisCO_large. 1 hit.
[Graphical view ]
SUPFAMi SSF51182. SSF51182. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.

Entry informationi

Entry nameiD5SVD7_PLAL2
AccessioniPrimary (citable) accession number: D5SVD7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3