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Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

Plim_1373

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. magnesium ion binding Source: InterPro
  2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbon fixation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1415-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
Gene namesi
Ordered Locus Names:Plim_1373Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5SVD7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

KOiK01601.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF07883. Cupin_2. 1 hit.
PF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.

Sequencei

Sequence statusi: Complete.

D5SVD7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFRVLYQLNC PKNSAEAVAR DIALEQTVEV PESLITDEVI WQNFAGQVVS
60 70 80 90 100
VRSVSEHVQV ASIEYHAHLA SGHLAQLMNL LFGNVSLKPG VRLLDVEFPE
110 120 130 140 150
SFLSGLAGPK LGIEGLRSAC GVWERPLLAT AIKPKGSSVA QLAQIAGEFA
160 170 180 190 200
AGGGDLVKDD HNLAESTFDA FRTRVEACQQ AVLSKTPPGQ KCLYFPNLSG
210 220 230 240 250
TLRDLERQAA FCVESGIRGV LVAPMIAGLE TIRHLSESFP LAILAHPTMS
260 270 280 290 300
GSFLQEGQGL SHAFWLSTMM RLCGCDGTVF PNTGGRFSFS QADCLSIADA
310 320 330 340 350
ARKPLGRLKS CFPAPAGGMS YASLPGMARD YGPDTIFLVG GGLLGYSENL
360 370 380 390 400
ADSTAAFRSR IEELFLTNQA SQNSNPDPRG QYVSSCELPA AYPPGAQNSG
410 420 430 440 450
IAEYAQGNEK SGISSLDSAN SIVTQLLKFL PGYRWEKREV SVYKPNAGLP
460 470 480 490 500
FAHVDRQELI GKFGESTAFD VRYFELAPGG YSSREKHFHT HVVIPVRGQG
510 520 530 540 550
QLECQGQIFP LQHLDIAYVP PLAVHQLSNP TDEPFGFLCI VDHDRDAPMA

P
Length:551
Mass (Da):59,501
Last modified:July 13, 2010 - v1
Checksum:iD9D5E0D4338818D5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67207.1.
RefSeqiYP_003629406.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG67207; ADG67207; Plim_1373.
GeneIDi9138068.
KEGGiplm:Plim_1373.
PATRICi38238804. VBIPlaLim6916_1653.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG67207.1.
RefSeqiYP_003629406.1. NC_014148.1.

3D structure databases

ProteinModelPortaliD5SVD7.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG67207; ADG67207; Plim_1373.
GeneIDi9138068.
KEGGiplm:Plim_1373.
PATRICi38238804. VBIPlaLim6916_1653.

Phylogenomic databases

KOiK01601.

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-1415-MONOMER.

Family and domain databases

Gene3Di2.60.120.10. 1 hit.
3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProiIPR013096. Cupin_2.
IPR014710. RmlC-like_jellyroll.
IPR011051. RmlC_Cupin.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF07883. Cupin_2. 1 hit.
PF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMiSSF51182. SSF51182. 1 hit.
SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.

Entry informationi

Entry nameiD5SVD7_PLAL2
AccessioniPrimary (citable) accession number: D5SVD7
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: January 7, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.