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D5SVD7

- D5SVD7_PLAL2

UniProt

D5SVD7 - D5SVD7_PLAL2

Protein
Submitted name:

Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit

Gene

Plim_1373

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (13 Jul 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Molecular functioni

    LyaseImported

    Enzyme and pathway databases

    BioCyciPLIM521674:GKE7-1415-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunitImported (EC:4.1.1.39Imported)
    Gene namesi
    Ordered Locus Names:Plim_1373Imported
    OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
    Taxonomic identifieri521674 [NCBI]
    Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
    ProteomesiUP000002220: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5SVD7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family.UniRule annotation

    Phylogenomic databases

    KOiK01601.
    OMAiYSENLAD.

    Family and domain databases

    Gene3Di2.60.120.10. 1 hit.
    3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR013096. Cupin_2.
    IPR014710. RmlC-like_jellyroll.
    IPR011051. RmlC_Cupin.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF07883. Cupin_2. 1 hit.
    PF00016. RuBisCO_large. 1 hit.
    [Graphical view]
    SUPFAMiSSF51182. SSF51182. 1 hit.
    SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5SVD7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFRVLYQLNC PKNSAEAVAR DIALEQTVEV PESLITDEVI WQNFAGQVVS    50
    VRSVSEHVQV ASIEYHAHLA SGHLAQLMNL LFGNVSLKPG VRLLDVEFPE 100
    SFLSGLAGPK LGIEGLRSAC GVWERPLLAT AIKPKGSSVA QLAQIAGEFA 150
    AGGGDLVKDD HNLAESTFDA FRTRVEACQQ AVLSKTPPGQ KCLYFPNLSG 200
    TLRDLERQAA FCVESGIRGV LVAPMIAGLE TIRHLSESFP LAILAHPTMS 250
    GSFLQEGQGL SHAFWLSTMM RLCGCDGTVF PNTGGRFSFS QADCLSIADA 300
    ARKPLGRLKS CFPAPAGGMS YASLPGMARD YGPDTIFLVG GGLLGYSENL 350
    ADSTAAFRSR IEELFLTNQA SQNSNPDPRG QYVSSCELPA AYPPGAQNSG 400
    IAEYAQGNEK SGISSLDSAN SIVTQLLKFL PGYRWEKREV SVYKPNAGLP 450
    FAHVDRQELI GKFGESTAFD VRYFELAPGG YSSREKHFHT HVVIPVRGQG 500
    QLECQGQIFP LQHLDIAYVP PLAVHQLSNP TDEPFGFLCI VDHDRDAPMA 550
    P 551
    Length:551
    Mass (Da):59,501
    Last modified:July 13, 2010 - v1
    Checksum:iD9D5E0D4338818D5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001744 Genomic DNA. Translation: ADG67207.1.
    RefSeqiWP_013109638.1. NC_014148.1.
    YP_003629406.1. NC_014148.1.

    Genome annotation databases

    EnsemblBacteriaiADG67207; ADG67207; Plim_1373.
    GeneIDi9138068.
    KEGGiplm:Plim_1373.
    PATRICi38238804. VBIPlaLim6916_1653.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001744 Genomic DNA. Translation: ADG67207.1 .
    RefSeqi WP_013109638.1. NC_014148.1.
    YP_003629406.1. NC_014148.1.

    3D structure databases

    ProteinModelPortali D5SVD7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADG67207 ; ADG67207 ; Plim_1373 .
    GeneIDi 9138068.
    KEGGi plm:Plim_1373.
    PATRICi 38238804. VBIPlaLim6916_1653.

    Phylogenomic databases

    KOi K01601.
    OMAi YSENLAD.

    Enzyme and pathway databases

    BioCyci PLIM521674:GKE7-1415-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.10. 1 hit.
    3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR013096. Cupin_2.
    IPR014710. RmlC-like_jellyroll.
    IPR011051. RmlC_Cupin.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF07883. Cupin_2. 1 hit.
    PF00016. RuBisCO_large. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51182. SSF51182. 1 hit.
    SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.

    Entry informationi

    Entry nameiD5SVD7_PLAL2
    AccessioniPrimary (citable) accession number: D5SVD7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 13, 2010
    Last sequence update: July 13, 2010
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3