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Protein

Superoxide dismutase

Gene

Plim_3497

Organism
Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-3563-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Plim_3497Imported
OrganismiPlanctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctomyces
ProteomesiUP000002220: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5SV24.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFWEVIAP.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5SV24-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPFTLPALPY APAALEPHID AQTMEIHHGK HHQAYINNAN KALEGHPELA
60 70 80 90 100
ALTAEQLISD LSKVPEGIRT VIRNNAGGHA NHSLFWTVLA PSAGGTPTGA
110 120 130 140 150
LEAAINHTFG TFDAFKEKFN AAATTRFGSG WAWLSVDSKG GLVVESTPNQ
160 170 180 190 200
DSPLMEGRTP ILGLDVWEHA YYLKYQNRRP DYIASFWNIV NWPEVSKRFA

AAGGK
Length:205
Mass (Da):22,355
Last modified:July 13, 2010 - v1
Checksum:i79A06F950339539E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG69310.1.
RefSeqiYP_003631509.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG69310; ADG69310; Plim_3497.
GeneIDi9140215.
KEGGiplm:Plim_3497.
PATRICi38244104. VBIPlaLim6916_4282.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG69310.1.
RefSeqiYP_003631509.1. NC_014148.1.

3D structure databases

ProteinModelPortaliD5SV24.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG69310; ADG69310; Plim_3497.
GeneIDi9140215.
KEGGiplm:Plim_3497.
PATRICi38244104. VBIPlaLim6916_4282.

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
OMAiFWEVIAP.

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-3563-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.

Entry informationi

Entry nameiD5SV24_PLAL2
AccessioniPrimary (citable) accession number: D5SV24
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: January 7, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.