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Protein

Superoxide dismutase

Gene

Plim_3497

Organism
Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi82Divalent metal cationUniRule annotation1
Metal bindingi165Divalent metal cationUniRule annotation1
Metal bindingi169Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-3522-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Plim_3497Imported
OrganismiPlanctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctopirus
Proteomesi
  • UP000002220 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521674.Plim_3497.

Structurei

3D structure databases

ProteinModelPortaliD5SV24.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 89Sod_Fe_NInterPro annotationAdd BLAST87
Domaini97 – 198Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.
OMAiKWGSFDK.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

D5SV24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPFTLPALPY APAALEPHID AQTMEIHHGK HHQAYINNAN KALEGHPELA
60 70 80 90 100
ALTAEQLISD LSKVPEGIRT VIRNNAGGHA NHSLFWTVLA PSAGGTPTGA
110 120 130 140 150
LEAAINHTFG TFDAFKEKFN AAATTRFGSG WAWLSVDSKG GLVVESTPNQ
160 170 180 190 200
DSPLMEGRTP ILGLDVWEHA YYLKYQNRRP DYIASFWNIV NWPEVSKRFA

AAGGK
Length:205
Mass (Da):22,355
Last modified:July 13, 2010 - v1
Checksum:i79A06F950339539E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG69310.1.
RefSeqiWP_013111741.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG69310; ADG69310; Plim_3497.
KEGGiplm:Plim_3497.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiD5SV24_PLAL2
AccessioniPrimary (citable) accession number: D5SV24
Entry historyiIntegrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 7, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported