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Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Plim_3447

Organism
Planctopirus limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-3513-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported
Gene namesi
Ordered Locus Names:Plim_3447Imported
OrganismiPlanctopirus limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctopirus
ProteomesiUP000002220 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521674.Plim_3447.

Family & Domainsi

Phylogenomic databases

KOiK01186.
OMAiGAYETIS.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

D5SUX4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQCLLTRICL AVTLGCMTSM NMLGLMASEP EVTTSVVVYS GKAAELKWIG
60 70 80 90 100
KPWASIEDPK GSTSALLASG QNRWLLSRSG IGAGDFQIRV RLQLAKLDGT
110 120 130 140 150
AAAFDFGSSR FGLDGKAGLL FVEGPLFRNQ PAATLKIADL VQPGAPFLLE
160 170 180 190 200
VIRKDEQTRF LINGQSVYTL DGWKGSVGRV GLRPWRNEMA VFDFSIKGNL
210 220 230 240 250
YELPAPPEPL FPSGFAGGTE GYHTFRIPSL TTTRSGTLLA LCEGRKNSTG
260 270 280 290 300
DSGDIDLVMK RSTDGGKTWS QPVVLWDNGE NTCGNPCLVV DQTTGELLLL
310 320 330 340 350
ATWNLGDDHE SEIIAQTSRD TRRVYVLRSK DDGLTWSQPV EITKDVKQPD
360 370 380 390 400
WTWYATGPGG GIQIQQGSHA GRLVIPCDHI EARTKKYYSH VIYSDDHGQT
410 420 430 440 450
WKLGGSTPAA GVNECEVVEL TGGKLLLNMR NASASRQRQT SMSEDGGLTW
460 470 480 490 500
SELKSDAALI EPVCQAAILR ASWPARSEPG WILFSNPAST TSRTNLTVRG
510 520 530 540 550
SRDDGQTWPV SKVLYTGPAA YSDLALLPDG KVGCLFEAGE ANYAESIVFV

TFGLDELTT
Length:559
Mass (Da):60,569
Last modified:July 13, 2010 - v1
Checksum:i4D41AE9E3F963A9E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG69260.1.
RefSeqiWP_013111691.1. NC_014148.1.
YP_003631459.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG69260; ADG69260; Plim_3447.
KEGGiplm:Plim_3447.
PATRICi38243982. VBIPlaLim6916_4221.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG69260.1.
RefSeqiWP_013111691.1. NC_014148.1.
YP_003631459.1. NC_014148.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521674.Plim_3447.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG69260; ADG69260; Plim_3447.
KEGGiplm:Plim_3447.
PATRICi38243982. VBIPlaLim6916_4221.

Phylogenomic databases

KOiK01186.
OMAiGAYETIS.

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-3513-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290Imported.

Entry informationi

Entry nameiD5SUX4_PLAL2
AccessioniPrimary (citable) accession number: D5SUX4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: June 24, 2015
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.