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Protein
Submitted name:

Uncharacterized protein

Gene

Plim_2614

Organism
Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi9CalciumCombined sources1
Metal bindingi55CalciumCombined sources1
Metal bindingi207CalciumCombined sources1

GO - Molecular functioni

Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-2643-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Ordered Locus Names:Plim_2614Imported
OrganismiPlanctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) (Planctomyces limnophilus)Imported
Taxonomic identifieri521674 [NCBI]
Taxonomic lineageiBacteriaPlanctomycetesPlanctomycetiaPlanctomycetalesPlanctomycetaceaePlanctopirus
Proteomesi
  • UP000002220 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521674.Plim_2614.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3RHTX-ray1.83A/B/C/D1-256[»]
SMRiD5SQH6.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiD5SQH6.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 219GATase1_likeInterPro annotationAdd BLAST207

Phylogenomic databases

eggNOGiENOG4106KQA. Bacteria.
COG5426. LUCA.
OrthoDBiPOG091H24XJ.

Family and domain databases

Gene3Di3.40.50.880. 1 hit.
InterProiIPR029062. Class_I_gatase-like.
IPR010768. GATase1-like.
[Graphical view]
PfamiPF07090. GATase1_like. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

D5SQH6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTRVLYCGDT SLETAAGYLA GLMTSWQWEF DYIPSHVGLD VGELLAKQDL
60 70 80 90 100
VILSDYPAER MTAQAIDQLV TMVKAGCGLV MLGGWESYHG LGGNWDQTLL
110 120 130 140 150
AEVLPVDIKS ADDRINFDQP TLAIPAAINS VSHPILQNLP WEDRPPTIGG
160 170 180 190 200
LNRIAAKAKA QTLLMARVWR PTFSLEHGKT TWEHADHHPL LVVGEAGTGR
210 220 230 240 250
VAAFASDVAP HWVGGLVDWG DERVTSQAPG AGAIEVGNLY SQFFRQMLEW

VAKSTR
Length:256
Mass (Da):27,961
Last modified:July 13, 2010 - v1
Checksum:i9940CE96F8FCB29F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG68438.1.
RefSeqiWP_013110869.1. NC_014148.1.

Genome annotation databases

EnsemblBacteriaiADG68438; ADG68438; Plim_2614.
KEGGiplm:Plim_2614.
PATRICi38241882. VBIPlaLim6916_3177.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001744 Genomic DNA. Translation: ADG68438.1.
RefSeqiWP_013110869.1. NC_014148.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3RHTX-ray1.83A/B/C/D1-256[»]
SMRiD5SQH6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521674.Plim_2614.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADG68438; ADG68438; Plim_2614.
KEGGiplm:Plim_2614.
PATRICi38241882. VBIPlaLim6916_3177.

Phylogenomic databases

eggNOGiENOG4106KQA. Bacteria.
COG5426. LUCA.
OrthoDBiPOG091H24XJ.

Enzyme and pathway databases

BioCyciPLIM521674:GKE7-2643-MONOMER.

Miscellaneous databases

EvolutionaryTraceiD5SQH6.

Family and domain databases

Gene3Di3.40.50.880. 1 hit.
InterProiIPR029062. Class_I_gatase-like.
IPR010768. GATase1-like.
[Graphical view]
PfamiPF07090. GATase1_like. 1 hit.
[Graphical view]
SUPFAMiSSF52317. SSF52317. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD5SQH6_PLAL2
AccessioniPrimary (citable) accession number: D5SQH6
Entry historyi
Integrated into UniProtKB/TrEMBL: July 13, 2010
Last sequence update: July 13, 2010
Last modified: November 30, 2016
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.