Amidohydrolase 2 - Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)

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D5SMT1 (D5SMT1_PLAL2) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Amidohydrolase 2 EMBL ADG67986.1

Gene names

Ordered Locus Names:

Plim_2160 EMBL ADG67986.1

Organism

Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) [Complete proteome] [HAMAP] EMBL ADG67986.1

Taxonomic identifier

Taxonomic lineage

Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Planctomyces ›

Protein attributes

Sequence length	431 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Molecular function	Hydrolase EMBL ADG67986.1
Technical term	3D-structure PDB 4I6V Complete proteome
Gene Ontology (GO)
Biological_process	glucuronate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glucuronate isomerase activity Inferred from electronic annotation. Source: InterPro hydrolase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

D5SMT1 [UniParc].

Last modified July 13, 2010. Version 1.
Checksum: C9B7ADEF986F9720
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431

49,248

        10         20         30         40         50         60 
MIATKSSPID QLCAQLDEIV LIDPHSHINP HAAASKNLGD ILGYHYFTEL AHSAGMPREV 

        70         80         90        100        110        120 
IEAPGITAKE KVGRIVEGLA HLDNTIQVKW LIELCERFFG FQDDRLTPDN WEALYDHSEK 

       130        140        150        160        170        180 
LMSAPDWEQT VLQKSQLEAV FLTNDFDDPL TGFDTKKYIP CLRTDDLVFH LQKPEVRQRL 

       190        200        210        220        230        240 
AKATGFDCAT PAKLIHAIGQ LFTHFVSHGA KACAISLPPD FEPTPVSHVD AEGPLRAAYA 

       250        260        270        280        290        300 
GHVLTTEQSQ ILSRFVFWTI AEFCSEHHLP FDLMIGVNRR VYESGVYQGQ DLFDQRVSLY 

       310        320        330        340        350        360 
QYRRLFNAFP RVKFPISVLA HASNMELVSY AWIFPNVIAN GHWWYSNIPA FIEPDCRSRL 

       370        380        390        400        410        420 
EAIPRNKNIG YYSDMYKLEF GWPKFQMYRR VLAKVLFEDF VVGRHWSEER AVELGRQILR 

       430 
GNVETIFSGA C

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Planctomyces limnophilus type strain (Mu 290)." Labutti K., Sikorski J., Schneider S., Nolan M., Lucas S., Glavina Del Rio T., Tice H., Cheng J.F., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A., Palaniappan K., Land M. Lapidus A. Stand. Genomic Sci. 3:47-56(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 43296 / DSM 3776 / IFAM 1008 / 290.
[2]	"The crystal structure of an amidohydrolase 2 from Planctomyces limnophilus DSM 3776." Fan Y., Tan K., Wu R., Bearden J., Joachimiak A. Submitted (NOV-2012) to the PDB data bank Cited for: X-RAY CRYSTALLOGRAPHY (2.14 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP001744 Genomic DNA. Translation: ADG67986.1.

RefSeq

YP_003630185.1. NC_014148.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4I6V	X-ray	2.14	A/B/C	1-431	[»]

ProteinModelPortal

ModBase

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

ADG67986; ADG67986; Plim_2160.

GeneID

KEGG

PATRIC

38240712. VBIPlaLim6916_2599.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

KO

OMA

Family and domain databases

Gene3D

1.10.2020.10. 1 hit.

InterPro

IPR006992. Amidohydro_2.
IPR003766. Uronate_isomerase.
IPR023177. Uronate_isomerase_dom2.
[Graphical view]

Pfam

PF04909. Amidohydro_2. 1 hit.
PF02614. UxaC. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

D5SMT1_PLAL2

Accession

Primary (citable) accession number: D5SMT1

Entry history

Integrated into UniProtKB/TrEMBL:	July 13, 2010
Last sequence update:	July 13, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info