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D5MK17

- D5MK17_9BACT

UniProt

D5MK17 - D5MK17_9BACT

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Protein
Elongation factor Tu
Gene
tufB, tuf, DAMO_0524, DAMO_0537
Organism
Candidatus Methylomirabilis oxyfera
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi82 – 865GTP By similarityUniRule annotation
Nucleotide bindingi137 – 1404GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciCMET671143-WGS:GSII-479-MONOMER.
CMET671143-WGS:GSII-493-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufBImported
Synonyms:tufUniRule annotation
ORF Names:DAMO_0524Imported, DAMO_0537Imported
OrganismiCandidatus Methylomirabilis oxyferaImported
Taxonomic identifieri671143 [NCBI]
Taxonomic lineageiBacteriacandidate division NC10Candidatus Methylomirabilis
ProteomesiUP000006898: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK02358.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5MK17-1 [UniParc]FASTAAdd to Basket

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MAKAKFERTK EHMNIGTIGH IDHGKTTLTA AITKVLHAAN AKVAFVPFDQ    50
IDKAPEEKER GITINIAHVE YETAKRHYAH VDCPGHADYI KNMITGAAQM 100
DGAILVVAAS EGPMPQTREH ILLARQVNVP NLVVFLNKVD LVDDPELLEL 150
VELEVRELLT AYNFPGDDIP FVRGSALKAL ETGSGDRSNP ASTPIFELMD 200
AVDAYFPAPV RVLDKPFLMP IEDVFSISGR GTVVTGRVER GIIKVSDEVE 250
LVGIRDTQRT VVTGVEMFRK LLDQGQAGDN VGLLLRGTKR EEVERGQVVA 300
KPGSIPPHTR FKAEAYILTK EEGGRHTPFF NGYRPQFYFR TTDVTGVCTL 350
PAGTEMVMPG DNVSLAVELI QPIAMEKELR FAIREGGRTV GAGVVSEVLE 400
Length:400
Mass (Da):43,861
Last modified:June 15, 2010 - v1
Checksum:i8F68E320F5F01FA1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565575 Genomic DNA. Translation: CBE67600.1.
FP565575 Genomic DNA. Translation: CBE67613.1.
RefSeqiWP_015743116.1. NC_013260.1.
YP_003205441.1. NC_013260.1.
YP_003205454.1. NC_013260.1.

Genome annotation databases

GeneIDi13098751.
13099136.
KEGGimox:DAMO_0524.
mox:DAMO_0537.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565575 Genomic DNA. Translation: CBE67600.1 .
FP565575 Genomic DNA. Translation: CBE67613.1 .
RefSeqi WP_015743116.1. NC_013260.1.
YP_003205441.1. NC_013260.1.
YP_003205454.1. NC_013260.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 13098751.
13099136.
KEGGi mox:DAMO_0524.
mox:DAMO_0537.

Phylogenomic databases

KOi K02358.

Enzyme and pathway databases

BioCyci CMET671143-WGS:GSII-479-MONOMER.
CMET671143-WGS:GSII-493-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Genoscope - CEA
    Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiD5MK17_9BACT
AccessioniPrimary (citable) accession number: D5MK17
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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