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D5MHI3 (D5MHI3_9BACT) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL CBE69215.1
Gene names
Name:cbbL EMBL CBE69215.1
ORF Names:DAMO_2165 EMBL CBE69215.1
OrganismCandidatus Methylomirabilis oxyfera [Complete proteome] EMBL CBE69215.1
Taxonomic identifier671143 [NCBI]
Taxonomic lineageBacteriacandidate division NC10Candidatus Methylomirabilis

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

Ontologies

Keywords
   Molecular functionLyase EMBL CBE69215.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5MHI3 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 0573994987187B54

FASTA48753,978
        10         20         30         40         50         60 
MAGAAGTSKD PKDRYKAGGV VPYKQMGYWR PEYEPKDTDV IAVFRITPQE GVDPDEAAAA 

        70         80         90        100        110        120 
VAGESSTATW TVVWTDRLTD HDAYRGKAYR VDPVPGSPGQ YFAYIAYDLD LFEDGSIVNV 

       130        140        150        160        170        180 
SASIIGNVFG FKPLKALRLE DMRFPVAYLK TFQGPPTGIV VERERLDKFG RPLLGATIKP 

       190        200        210        220        230        240 
KLGLSGKNYG RVVYEALKGG LDFTKDDENI NSQAFMHWRD RFLFAMEGVN RASAATGEVK 

       250        260        270        280        290        300 
GHYLNISAGT MEDMYERAEF AKELGSVIIM IDLVIGYTAI QSISKWARKN DMMLHLHRAG 

       310        320        330        340        350        360 
HSTYTRQKTH GVNFRVICKW MRMAGVDHIH AGTVIGKLEG DPYMVKGFYD TLRETHTPMN 

       370        380        390        400        410        420 
LQNGLFFDQD WASLRKVMPV ASGGIHAGQM HQLLHYFGED VVMQFGGGTI GHPTGIAAGA 

       430        440        450        460        470        480 
TANRVALEAM VQARNEGRDY FNEGPEILAN AARWCQPLRT ALEVWKDITF NYASTDTADF 


VPTTTAV 

« Hide

References

[1]Genoscope - CEA
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Nitrite-driven anaerobic methane oxidation by oxygenic bacteria."
Ettwig K.F., Butler M.K., Le Paslier D., Pelletier E., Mangenot S., Kuypers M.M.M., Schreiber F., Dutilh B.E., Zedelius J., de Beer D., Gloerich J., Wessels H.J.C.T., van Allen T., Luesken F., Wu M., van de Pas-Schoonen K.T., Op den Camp H.J.M., Janssen-Megens E.M. expand/collapse author list , Francoijs K-J., Stunnenberg H., Weissenbach J., Jetten M.S.M., Strous M.
Nature 464:543-548(2010)
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP565575 Genomic DNA. Translation: CBE69215.1.
RefSeqYP_003207046.1. NC_013260.1.

3D structure databases

ProteinModelPortalD5MHI3.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDED5MHI3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID13097391.
KEGGmox:DAMO_2165.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01601.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPMF_01338. RuBisCO_L_type1.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5MHI3_9BACT
AccessionPrimary (citable) accession number: D5MHI3
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: February 19, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)