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D5K9W5 (D5K9W5_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:POU5F1P4 EMBL ADE48602.1
OrganismHomo sapiens (Human) EMBL ADE48602.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Sequence similarities

Contains 1 POU-specific domain.

Contains POU-specific domain. SAAS SAAS000327

Contains homeobox DNA-binding domain. SAAS SAAS000327

Sequences

Sequence LengthMass (Da)Tools
D5K9W5 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: AC224B6BFE4CF433

FASTA28631,071
        10         20         30         40         50         60 
MPAFLPPPGG GGDGPGGPEP GWVDPRTWLS FQGPPGGPGI GPGVGSGSEV WGIPPCPPLY 

        70         80         90        100        110        120 
EFCGGMAYCG PQVGVRLVPQ GGLETSQPEG EAGVRVESNS DGTSLEPCAA PPGAVKLEKE 

       130        140        150        160        170        180 
KLEQNPQESQ NIKALQKELE QFAKLLKQKR ITLGYTQADV GLTLGVLFGK VFSQTTICRF 

       190        200        210        220        230        240 
EGLQLSFKNM CKLRPLLQKR VEEADNNENL QETCKAETLL QARKRKRTSI ENRVRGNLEN 

       250        260        270        280 
LFLQCPKPTL QQISHIAQQL GLEKDVVRVW FCNRCQKGKQ SSSDYA 

« Hide

References

[1]"Expression of OCT4 Pseudogenes in Human Somatic Tumors."
Zhao S., Yuan Q., Liu S., Zhang Y., Liu H., Wang F., Liu K., Hao A.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Glioma EMBL ADE48602.1.
[2]"Expression of OCT4 pseudogenes in two human somatic tumours: glioma and breast carcinoma."
Zhao S., Yuan Q., Guo Y., Liu S., Zhang Y., Wang J., Liu H., Wang F., Liu K., Ling E.-A., Hao A.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Glioma WHO grade IV EMBL ADW77436.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU480894 mRNA. Translation: ADE48602.1.
HQ122806 mRNA. Translation: ADW77436.1.
HQ122815 mRNA. Translation: ADW77443.1.
UniGeneHs.632482.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D1.10.10.60. 1 hit.
1.10.260.40. 1 hit.
InterProIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR010982. Lambda_DNA-bd_dom.
IPR013847. POU.
IPR015585. POU_dom_5.
IPR000327. POU_specific.
[Graphical view]
PANTHERPTHR11636:SF15. PTHR11636:SF15. 1 hit.
PfamPF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
[Graphical view]
PRINTSPR00028. POUDOMAIN.
SMARTSM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
[Graphical view]
SUPFAMSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35491886.

Entry information

Entry nameD5K9W5_HUMAN
AccessionPrimary (citable) accession number: D5K9W5
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.