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D5K9S8 (D5K9S8_HUMAN) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:POU5F1P4 EMBL ADE48565.1
OrganismHomo sapiens (Human) EMBL ADE48565.1
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length286 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subcellular location

Nucleus By similarity RuleBase RU000682.

Sequence similarities

Contains 1 POU-specific domain.

Contains POU-specific domain. SAAS SAAS000327

Contains homeobox DNA-binding domain. SAAS SAAS000327

Sequences

Sequence LengthMass (Da)Tools
D5K9S8 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: A2401689E52BA114

FASTA28631,159
        10         20         30         40         50         60 
MPAFLPPPGG GGDGPGGPEP GWVDPRTWLS FQGPPGGPGI GPGVGSGSEV WGIPPCPPLY 

        70         80         90        100        110        120 
EFCGGMAYCG PQVGVRLVPQ GGLETSQPEG EAGVRVESNS DGTSLEPCTV PPGAVKLEKE 

       130        140        150        160        170        180 
KLEQNPQESQ NIKALQKELE QFAKLLKQKR ITLGYTQADV GLTLGVLFGK VFSQTTICRF 

       190        200        210        220        230        240 
EGLQLSFKNM CKLRPLLQKW VEEADNNENL QETCKAETLL QARKRKRTSI ENRVRGNLEN 

       250        260        270        280 
LFLQCPKPTL QQISHIAQQL GLEKDVVRVW FCNRCQKGKQ SSSDYA 

« Hide

References

[1]"Expression of OCT4 Pseudogenes in Human Somatic Tumors."
Zhao S., Yuan Q., Liu S., Zhang Y., Liu H., Wang F., Liu K., Hao A.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Breast carcinoma EMBL ADE48608.1 and Glioma EMBL ADE48589.1.
[2]"Expression of OCT4 pseudogenes in two human somatic tumours: glioma and breast carcinoma."
Zhao S., Yuan Q., Guo Y., Liu S., Zhang Y., Wang J., Liu H., Wang F., Liu K., Ling E.-A., Hao A.
Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Breast cancer luminal A subtype EMBL ADW77465.1, Glioma WHO grade II EMBL ADW77370.1, Glioma WHO grade III EMBL ADW77393.1 and Glioma WHO grade IV EMBL ADW77433.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU480839 mRNA. Translation: ADE48565.1.
GU480848 mRNA. Translation: ADE48573.1.
GU480862 mRNA. Translation: ADE48578.1.
GU480867 mRNA. Translation: ADE48582.1.
GU480875 mRNA. Translation: ADE48589.1.
GU480879 mRNA. Translation: ADE48592.1.
GU480881 mRNA. Translation: ADE48594.1.
GU480882 mRNA. Translation: ADE48595.1.
GU480904 mRNA. Translation: ADE48608.1.
HQ122676 mRNA. Translation: ADW77328.1.
HQ122677 mRNA. Translation: ADW77329.1.
HQ122681 mRNA. Translation: ADW77330.1.
HQ122687 mRNA. Translation: ADW77334.1.
HQ122690 mRNA. Translation: ADW77335.1.
HQ122698 mRNA. Translation: ADW77340.1.
HQ122700 mRNA. Translation: ADW77342.1.
HQ122701 mRNA. Translation: ADW77343.1.
HQ122703 mRNA. Translation: ADW77345.1.
HQ122704 mRNA. Translation: ADW77346.1.
HQ122705 mRNA. Translation: ADW77347.1.
HQ122708 mRNA. Translation: ADW77349.1.
HQ122709 mRNA. Translation: ADW77350.1.
HQ122732 mRNA. Translation: ADW77370.1.
HQ122733 mRNA. Translation: ADW77371.1.
HQ122734 mRNA. Translation: ADW77372.1.
HQ122735 mRNA. Translation: ADW77373.1.
HQ122736 mRNA. Translation: ADW77374.1.
HQ122740 mRNA. Translation: ADW77378.1.
HQ122741 mRNA. Translation: ADW77379.1.
HQ122742 mRNA. Translation: ADW77380.1.
HQ122743 mRNA. Translation: ADW77381.1.
HQ122744 mRNA. Translation: ADW77382.1.
HQ122746 mRNA. Translation: ADW77383.1.
HQ122748 mRNA. Translation: ADW77384.1.
HQ122757 mRNA. Translation: ADW77393.1.
HQ122758 mRNA. Translation: ADW77394.1.
HQ122760 mRNA. Translation: ADW77396.1.
HQ122761 mRNA. Translation: ADW77397.1.
HQ122763 mRNA. Translation: ADW77399.1.
HQ122764 mRNA. Translation: ADW77400.1.
HQ122765 mRNA. Translation: ADW77401.1.
HQ122766 mRNA. Translation: ADW77402.1.
HQ122767 mRNA. Translation: ADW77403.1.
HQ122768 mRNA. Translation: ADW77404.1.
HQ122771 mRNA. Translation: ADW77406.1.
HQ122772 mRNA. Translation: ADW77407.1.
HQ122774 mRNA. Translation: ADW77409.1.
HQ122775 mRNA. Translation: ADW77410.1.
HQ122778 mRNA. Translation: ADW77412.1.
HQ122779 mRNA. Translation: ADW77413.1.
HQ122780 mRNA. Translation: ADW77414.1.
HQ122801 mRNA. Translation: ADW77433.1.
HQ122805 mRNA. Translation: ADW77435.1.
HQ122808 mRNA. Translation: ADW77438.1.
HQ122813 mRNA. Translation: ADW77442.1.
HQ122839 mRNA. Translation: ADW77465.1.
UniGeneHs.632482.

3D structure databases

ProteinModelPortalD5K9S8.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDED5K9S8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

UCSCuc010pgd.2. human.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
1.10.260.40. 1 hit.
InterProIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
IPR010982. Lambda_DNA-bd_dom.
IPR013847. POU.
IPR015585. POU_dom_5.
IPR000327. POU_specific.
[Graphical view]
PANTHERPTHR11636:SF15. PTHR11636:SF15. 1 hit.
PfamPF00046. Homeobox. 1 hit.
PF00157. Pou. 1 hit.
[Graphical view]
PRINTSPR00028. POUDOMAIN.
SMARTSM00389. HOX. 1 hit.
SM00352. POU. 1 hit.
[Graphical view]
SUPFAMSSF46689. SSF46689. 1 hit.
SSF47413. SSF47413. 1 hit.
PROSITEPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
PS00035. POU_1. 1 hit.
PS00465. POU_2. 1 hit.
PS51179. POU_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio35491865.

Entry information

Entry nameD5K9S8_HUMAN
AccessionPrimary (citable) accession number: D5K9S8
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.