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Protein
Submitted name:

POU domain transcription factor OCT4-pg3

Gene

POU5F1P3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
POU domain transcription factor OCT4-pg3Imported
Gene namesi
Name:POU5F1P3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PRIDEiD5K9S7.

Structurei

3D structure databases

ProteinModelPortaliD5K9S7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR015585. POU_dom_5.
IPR000327. POU_specific.
[Graphical view]
PANTHERiPTHR11636:SF15. PTHR11636:SF15. 1 hit.
PfamiPF00157. Pou. 1 hit.
[Graphical view]
SMARTiSM00352. POU. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS51179. POU_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5K9S7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGHLASDFA FSPPPGGGGD GPGGPEPGWV DPRTWLSFQG PPGGPGIGPG
60 70 80 90 100
FGPGSEEWGI PPCPPPYEFC GGMAYCGPQT GVGLVPQDGL ETSQPEGEAG
110 120 130 140 150
VGVESNSDGA SPEPCTVPSG AVKLEKEKLE QNPKESQDIK ALQKELEQFA
160 170 180
KLLKQKRITL GYTQADVAHP GGSIWEGVQP NDHLPL
Length:186
Mass (Da):19,206
Last modified:June 15, 2010 - v1
Checksum:iA1A8E955E7A26AEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU480838 mRNA. Translation: ADE48564.1.
GU480876 mRNA. Translation: ADE48590.1.
GU480887 mRNA. Translation: ADE48598.1.
GU480892 mRNA. Translation: ADE48600.1.
GU480897 mRNA. Translation: ADE48605.1.
GU480907 mRNA. Translation: ADE48611.1.
HQ122722 mRNA. Translation: ADW77361.1.
HQ122724 mRNA. Translation: ADW77363.1.
HQ122725 mRNA. Translation: ADW77364.1.
HQ122726 mRNA. Translation: ADW77365.1.
HQ122728 mRNA. Translation: ADW77367.1.
HQ122729 mRNA. Translation: ADW77368.1.
HQ122730 mRNA. Translation: ADW77369.1.
HQ122753 mRNA. Translation: ADW77389.1.
HQ122754 mRNA. Translation: ADW77390.1.
HQ122791 mRNA. Translation: ADW77425.1.
HQ122792 mRNA. Translation: ADW77426.1.
HQ122793 mRNA. Translation: ADW77427.1.
HQ122794 mRNA. Translation: ADW77428.1.
HQ122795 mRNA. Translation: ADW77429.1.
HQ122796 mRNA. Translation: ADW77430.1.
HQ122828 mRNA. Translation: ADW77456.1.
HQ122829 mRNA. Translation: ADW77457.1.
HQ122831 mRNA. Translation: ADW77459.1.
UniGeneiHs.646545.

Genome annotation databases

UCSCiuc010sgi.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GU480838 mRNA. Translation: ADE48564.1.
GU480876 mRNA. Translation: ADE48590.1.
GU480887 mRNA. Translation: ADE48598.1.
GU480892 mRNA. Translation: ADE48600.1.
GU480897 mRNA. Translation: ADE48605.1.
GU480907 mRNA. Translation: ADE48611.1.
HQ122722 mRNA. Translation: ADW77361.1.
HQ122724 mRNA. Translation: ADW77363.1.
HQ122725 mRNA. Translation: ADW77364.1.
HQ122726 mRNA. Translation: ADW77365.1.
HQ122728 mRNA. Translation: ADW77367.1.
HQ122729 mRNA. Translation: ADW77368.1.
HQ122730 mRNA. Translation: ADW77369.1.
HQ122753 mRNA. Translation: ADW77389.1.
HQ122754 mRNA. Translation: ADW77390.1.
HQ122791 mRNA. Translation: ADW77425.1.
HQ122792 mRNA. Translation: ADW77426.1.
HQ122793 mRNA. Translation: ADW77427.1.
HQ122794 mRNA. Translation: ADW77428.1.
HQ122795 mRNA. Translation: ADW77429.1.
HQ122796 mRNA. Translation: ADW77430.1.
HQ122828 mRNA. Translation: ADW77456.1.
HQ122829 mRNA. Translation: ADW77457.1.
HQ122831 mRNA. Translation: ADW77459.1.
UniGeneiHs.646545.

3D structure databases

ProteinModelPortaliD5K9S7.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiD5K9S7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

UCSCiuc010sgi.2. human.

Miscellaneous databases

NextBioi35491864.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
InterProiIPR010982. Lambda_DNA-bd_dom.
IPR015585. POU_dom_5.
IPR000327. POU_specific.
[Graphical view]
PANTHERiPTHR11636:SF15. PTHR11636:SF15. 1 hit.
PfamiPF00157. Pou. 1 hit.
[Graphical view]
SMARTiSM00352. POU. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
PROSITEiPS51179. POU_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Expression of OCT4 Pseudogenes in Human Somatic Tumors."
    Zhao S., Yuan Q., Liu S., Zhang Y., Liu H., Wang F., Liu K., Hao A.
    Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Breast carcinomaImported and GliomaImported.
  2. "Expression of OCT4 pseudogenes in two human somatic tumours: glioma and breast carcinoma."
    Zhao S., Yuan Q., Guo Y., Liu S., Zhang Y., Wang J., Liu H., Wang F., Liu K., Ling E.-A., Hao A.
    Submitted (AUG-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: Breast cancer luminal A subtypeImported, Glioma WHO grade IIImported, Glioma WHO grade IIIImported and Glioma WHO grade IVImported.

Entry informationi

Entry nameiD5K9S7_HUMAN
AccessioniPrimary (citable) accession number: D5K9S7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 29, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.