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D5HB48 (D5HB48_SALRM) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
6-phosphofructokinase HAMAP-Rule MF_00339
Short name=Phosphofructokinase HAMAP-Rule MF_00339
EC=2.7.1.11 HAMAP-Rule MF_00339
Alternative name(s):
Phosphohexokinase HAMAP-Rule MF_00339
Gene names
Name:pfkA HAMAP-Rule MF_00339 EMBL CBH25253.1
Ordered Locus Names:SRM_02332 EMBL CBH25253.1
OrganismSalinibacter ruber (strain M8) [Complete proteome] [HAMAP] EMBL CBH25253.1
Taxonomic identifier761659 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter ›

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + D-fructose 6-phosphate = ADP + D-fructose 1,6-bisphosphate. HAMAP-Rule MF_00339 SAAS SAAS000023

Pathway

Carbohydrate degradation; glycolysis; D-glyceraldehyde 3-phosphate and glycerone phosphate from D-glucose: step 3/4. HAMAP-Rule MF_00339 SAAS SAAS000023

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00339.

Sequence similarities

Belongs to the phosphofructokinase family. HAMAP-Rule MF_00339

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding25 – 295ATP By similarity HAMAP-Rule MF_00339
Nucleotide binding165 – 1695ATP By similarity HAMAP-Rule MF_00339
Nucleotide binding182 – 19817ATP By similarity HAMAP-Rule MF_00339

Sites

Active site1381Proton acceptor By similarity HAMAP-Rule MF_00339
Metal binding1961Magnesium; via carbonyl oxygen By similarity HAMAP-Rule MF_00339
Metal binding1981Magnesium By similarity HAMAP-Rule MF_00339
Binding site1731Substrate By similarity HAMAP-Rule MF_00339
Binding site2771Substrate By similarity HAMAP-Rule MF_00339
Binding site2831Substrate By similarity HAMAP-Rule MF_00339
Binding site2861Substrate By similarity HAMAP-Rule MF_00339

Sequences

Sequence LengthMass (Da)Tools
D5HB48 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 61A6205E6B33A745

FASTA37940,144
        10         20         30         40         50         60 
MPSDSLRVGV LTGGGDCPGI NAALRAVTKS LTLQHDAEVL GFLDGFRGVV DRNVEPLHYR 

        70         80         90        100        110        120 
DVSGILTRGG TILGASNKAD PFNYLPRGGA DVSAQVMRTY RTLDLDALVA IGGDGTMSIA 

       130        140        150        160        170        180 
HRLTDLGVDI VGVPKTIDND LVGTDRTVGF DTAVSTATDA IDRIHTTAQS HHRVMIVETM 

       190        200        210        220        230        240 
GRYSGWIALH AGVASGTDVI LLPEIEYEVE TVADVCRDRE RSGQRFTIVA VAEGARRKEG 

       250        260        270        280        290        300 
DYVVQERGDE YTDSIRLGGI SRVLADQLRE HLDTSIRTTV LGHMQRGGSP TAYDRTLATT 

       310        320        330        340        350        360 
LGTRAATLVA EGTTGVMVAV QNDAFTQVPL DEIAGKTRTV PLDDPLIASG LDVGTSFGVA 

       370 
VSDLSEAASH SKPASPIQP

« Hide

References

« Hide 'large scale' references
[1]"Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
ISME J. -:0-0(2010)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M8.
[2]"Genome sequence of Salinibacter ruber M8."
Genoscope
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FP565814 Genomic DNA. Translation: CBH25253.1.
RefSeqYP_003572205.1. NC_014032.1.

3D structure databases

ProteinModelPortalD5HB48.
ModBaseSearch...

Proteomic databases

PRIDED5HB48.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH25253; CBH25253; SRM_02332.
GeneID8995079.
KEGGsrm:SRM_02332.
PATRIC35492548. VBISalRub49863_2254.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000248869.
KOK00850.
PhylomeDBD5HB48.

Enzyme and pathway databases

UniPathwayUPA00109; UER00182.

Family and domain databases

HAMAPMF_00339. Phosphofructokinase.
InterProIPR012003. ATP_PFK_prok.
IPR022953. Phosphofructokinase.
IPR015912. Phosphofructokinase_CS.
IPR000023. Phosphofructokinase_dom.
[Graphical view]
PfamPF00365. PFK. 1 hit.
[Graphical view]
PIRSFPIRSF000532. ATP_PFK_prok. 1 hit.
PRINTSPR00476. PHFRCTKINASE.
SUPFAMSSF53784. Ppfruckinase. 1 hit.
PROSITEPS00433. PHOSPHOFRUCTOKINASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5HB48_SALRM
AccessionPrimary (citable) accession number: D5HB48
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info