D5HA01 (D5HA01_SALRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Name:	sodA EMBL CBH24856.1
Ordered Locus Names:	SRM_01935 EMBL CBH24856.1

Organism

Salinibacter ruber (strain M8) [Complete proteome] [HAMAP] EMBL CBH24856.1

Taxonomic identifier

761659 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter › Salinibacter ruber

Protein attributes

Sequence length	205 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL CBH24856.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5HA01 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 972578179E772040	FASTA	205	23,061
	10 20 30 40 50 60 MAFDLPELPY DYDALEPHID EQTMRIHHDK HHAGYTRKLN NALEGHDDLQ EHSIEELLAG 70 80 90 100 110 120 LDTLPTDVQT PVRQNGGGFY NHRLFWNVMS PDGGGTPDGD LADAIHDAFG SYEDFKDAFV 130 140 150 160 170 180 DAATGQFGSG WGWLVAQPNG DVTVTSTPNQ DNPLLEGHTP ILGIDVWEHS YYLNYQNERG 190 200 TYVDEWWNVV DWDTVGENYD EIVAA

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains." Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J. ISME J. -:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: M8.
[2]	"Genome sequence of Salinibacter ruber M8." Genoscope Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: M8.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP565814 Genomic DNA. Translation: CBH24856.1.
RefSeq	YP_003571808.1. NC_014032.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBH24856; CBH24856; SRM_01935.
GeneID	8996670.
KEGG	srm:SRM_01935.
PATRIC	35491700. VBISalRub49863_1841.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
PhylomeDB	D5HA01.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5HA01_SALRM

Accession

Primary (citable) accession number: D5HA01

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)