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D5HA01

- D5HA01_SALRM

UniProt

D5HA01 - D5HA01_SALRM

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Protein

Superoxide dismutase

Gene
sodA, SRM_01935
Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity.

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciSRUB761659:GHC6-1958-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
Ordered Locus Names:SRM_01935Imported
OrganismiSalinibacter ruber (strain M8)Imported
Taxonomic identifieri761659 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
ProteomesiUP000000933: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5HA01.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000013583.
KOiK04564.
PhylomeDBiD5HA01.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5HA01-1 [UniParc]FASTAAdd to Basket

« Hide

MAFDLPELPY DYDALEPHID EQTMRIHHDK HHAGYTRKLN NALEGHDDLQ    50
EHSIEELLAG LDTLPTDVQT PVRQNGGGFY NHRLFWNVMS PDGGGTPDGD 100
LADAIHDAFG SYEDFKDAFV DAATGQFGSG WGWLVAQPNG DVTVTSTPNQ 150
DNPLLEGHTP ILGIDVWEHS YYLNYQNERG TYVDEWWNVV DWDTVGENYD 200
EIVAA 205
Length:205
Mass (Da):23,061
Last modified:June 15, 2010 - v1
Checksum:i972578179E772040
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH24856.1.
RefSeqiYP_003571808.1. NC_014032.1.

Genome annotation databases

EnsemblBacteriaiCBH24856; CBH24856; SRM_01935.
GeneIDi8996670.
KEGGisrm:SRM_01935.
PATRICi35491700. VBISalRub49863_1841.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH24856.1 .
RefSeqi YP_003571808.1. NC_014032.1.

3D structure databases

ProteinModelPortali D5HA01.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH24856 ; CBH24856 ; SRM_01935 .
GeneIDi 8996670.
KEGGi srm:SRM_01935.
PATRICi 35491700. VBISalRub49863_1841.

Phylogenomic databases

HOGENOMi HOG000013583.
KOi K04564.
PhylomeDBi D5HA01.

Enzyme and pathway databases

BioCyci SRUB761659:GHC6-1958-MONOMER.

Family and domain databases

InterProi IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view ]
PANTHERi PTHR11404. PTHR11404. 1 hit.
Pfami PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000349. SODismutase. 1 hit.
PRINTSi PR01703. MNSODISMTASE.
SUPFAMi SSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEi PS00088. SOD_MN. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
    Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
    ISME J. -:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: M8.
  2. "Genome sequence of Salinibacter ruber M8."
    Genoscope
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M8.

Entry informationi

Entry nameiD5HA01_SALRM
AccessioniPrimary (citable) accession number: D5HA01
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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