D5H8C2 (D5H8C2_SALRM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase E1 component EMBL CBH24277.1
EC=1.2.4.2 EMBL CBH24277.1

Gene names

Name:	odhA EMBL CBH24277.1
Ordered Locus Names:	SRM_01356 EMBL CBH24277.1

Organism

Salinibacter ruber (strain M8) [Complete proteome] [HAMAP] EMBL CBH24277.1

Taxonomic identifier

761659 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Bacteroidetes Order II. Incertae sedis › Rhodothermaceae › Salinibacter › Salinibacter ruber

Protein attributes

Sequence length	1243 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL CBH24277.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: EC thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5H8C2 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: DC3E669C8A0DD58D	FASTA	1,243	138,925
	10 20 30 40 50 60 MSSLGFNTGY IEELYKQYQD DPDSVSESWR EFFADYDPDA SFIPVDRTTA GDGEATTPPE 70 80 90 100 110 120 EPTEPEPTDR DSSPDASPAP PAEADDGVVE PLRPASAPAV DEDQADVTAM TGPSAKVVEN 130 140 150 160 170 180 MEDSLGIPTA TSARTIPVKL LDENRNLLND YQKQVGGEKV SYTHIIAYAM VQAMQKYPDM 190 200 210 220 230 240 NTTFRRNEDG TPEHVKPDQI NLGLAIDVER RGERTLLVPN LKDAGSLSFA EFLGTYNNIV 250 260 270 280 290 300 GRALDGDLDL SDFQGTTATL TNPGMIGTSM SVARLMPGQG VIMGAGAIDF PPEYRGYDSE 310 320 330 340 350 360 VASKAGVSPV MTLTSTYDHR VIQGATSGAF LNHIEELLTG NHDFYQRIFS DLGVPYQPFR 370 380 390 400 410 420 MATDSTPQLG RSRPQDELDM TEKQAAVLQL IRAYRVRGHL QADINPLGYE WQYHEELDPA 430 440 450 460 470 480 TYGLTVWDLD REFITGGLGG EDKLPLREIL SILRKSYTSK VGTAFMHISD PEEKTWIQNR 490 500 510 520 530 540 IEPMRNAGSP SEEERHRIVQ KLNAAEAFER FLHTKYIGHK RFSLEGSETM IPLIDTLLSD 550 560 570 580 590 600 AADEGVEEVV MGMAHRGRLN VLANIIGKPY EEIFSKFEGN IDPNTTQGSG DVKYHLGAEG 610 620 630 640 650 660 DVTSPDGNEI SVTLASNPSH LEAVNPVVEG MSRAKQNLLR DEHPEAAEDD YHDAVMPLLI 670 680 690 700 710 720 HGDAGFAGQG VVAETLNLSK LRGYTTGGTV HLVINNQIGF TTPPGDARSS TYATDLARAI 730 740 750 760 770 780 EAPIFHVNGD DPETCVRIAR LAFEYRQRFN KDVVIDMMCY RVHGHNEGDE PTFTQPLLYE 790 800 810 820 830 840 KIEEKRSPRK LYTEMLLRRG EIEPDEAEQM LDDYRGRLQE AFERTKDLEE KDAEEALEER 850 860 870 880 890 900 VQRTADDRLP RVDTTAEREH LERVVEVLTD FPDDFNVHRK LERLFGKRDD LFYDEKRIDW 910 920 930 940 950 960 AFSETLAFGS LLQEGTRVRL SGQDSRRATF SQRHAVLIDQ ETGAEYTPLN NLTDDQERLL 970 980 990 1000 1010 1020 IYDSLLSEYA VAGFEYGYSV VDKNALTCWE AQFGDFANGA EIVWDQFVSA AEEKWGQTSG 1030 1040 1050 1060 1070 1080 LVALLPHAYE GQGPEHSSAR LERFLQLCAE QNMIVANFST PANYFHALRR QVKRDVKKPL 1090 1100 1110 1120 1130 1140 IIMTPKSLLR HPKCVSTPED LMEGGVQEII PAEADPAGTT RHILCSGKVY YDLVTALEDS 1150 1160 1170 1180 1190 1200 DRRDEIAITR LEQFYPFPAS DLQEELERYS EADETVWVQE EPQNMGAWSF VSPRFETLLD 1210 1220 1230 1240 EIHGPCEQRI QYVGRPASAS PATGSAKVHD REQEQLVGDA LGL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains." Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J. ISME J. -:0-0(2010) Cited for: NUCLEOTIDE SEQUENCE. Strain: M8.
[2]	"Genome sequence of Salinibacter ruber M8." Genoscope Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: M8.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FP565814 Genomic DNA. Translation: CBH24277.1.
RefSeq	YP_003571229.1. NC_014032.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBH24277; CBH24277; SRM_01356.
GeneID	8996583.
KEGG	srm:SRM_01356.
PATRIC	35490532. VBISalRub49863_1265.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000259587.
KO	K00164.
Family and domain databases
Gene3D	3.30.559.10. 1 hit.
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5H8C2_SALRM

Accession

Primary (citable) accession number: D5H8C2

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)