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D5H7Z9

- D5H7Z9_SALRM

UniProt

D5H7Z9 - D5H7Z9_SALRM

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Protein
Elongation factor Tu
Gene
tufA, tuf, SRM_01233
Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi82 – 865GTP By similarityUniRule annotation
Nucleotide bindingi137 – 1404GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciSRUB761659:GHC6-1246-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufAImported
Synonyms:tufUniRule annotation
Ordered Locus Names:SRM_01233Imported
OrganismiSalinibacter ruber (strain M8)Imported
Taxonomic identifieri761659 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
ProteomesiUP000000933: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

PTM / Processingi

Proteomic databases

PRIDEiD5H7Z9.

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliD5H7Z9.
SMRiD5H7Z9. Positions 2-396.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
PhylomeDBiD5H7Z9.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5H7Z9-1 [UniParc]FASTAAdd to Basket

« Hide

MAKEEFAREK PHVNVGTIGH VDHGKTTLTA AITKVLAERV GGAAEQTFEA    50
IDNAPEERER GITIATSHVE YETENRHYAH VDCPGHADYV KNMVTGAAQM 100
DGAILVVGSD DGPMPQTREH ILLARQVGVP YLVVFMNKTD LVDDAELLEL 150
VEMEVRELLT EYEFPGDEVP VVRGSALQAL ESSEEHEEKI MELMEAVDEY 200
IPTPERDVEK PFLMPVEDIF SITGRGTVVT GRIERGRVQL QDEIEIVGMQ 250
EEKMDSVVTG IEMFNKTLEE GEAGDNAGIL LRGIEKEEVK RGMVLAEPGT 300
VTPHKEFECE VYVLSKEEGG RHTPFFDGYQ PQFYFRTTDV TGSIELPEGV 350
EMVMPGDNAT FEGSLIEPVA LEEGLRFAIR EGGHTVGAGV VTDILD 396
Length:396
Mass (Da):43,729
Last modified:June 15, 2010 - v1
Checksum:i64D19E50888E7698
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH24154.1.
RefSeqiWP_011403793.1. NC_014032.1.
YP_003571106.1. NC_014032.1.

Genome annotation databases

EnsemblBacteriaiCBH24154; CBH24154; SRM_01233.
GeneIDi8995912.
KEGGisrm:SRM_01233.
PATRICi35490286. VBISalRub49863_1145.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH24154.1 .
RefSeqi WP_011403793.1. NC_014032.1.
YP_003571106.1. NC_014032.1.

3D structure databases

ProteinModelPortali D5H7Z9.
SMRi D5H7Z9. Positions 2-396.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi D5H7Z9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH24154 ; CBH24154 ; SRM_01233 .
GeneIDi 8995912.
KEGGi srm:SRM_01233.
PATRICi 35490286. VBISalRub49863_1145.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
PhylomeDBi D5H7Z9.

Enzyme and pathway databases

BioCyci SRUB761659:GHC6-1246-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
    Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
    ISME J. -:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: M8.
  2. "Genome sequence of Salinibacter ruber M8."
    Genoscope
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M8.

Entry informationi

Entry nameiD5H7Z9_SALRM
AccessioniPrimary (citable) accession number: D5H7Z9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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