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D5H6D3

- D5H6D3_SALRM

UniProt

D5H6D3 - D5H6D3_SALRM

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Protein
Submitted name:

2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit

Gene
acoA, pdhA, SRM_00667
Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. pyruvate dehydrogenase (acetyl-transferring) activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumSAAS annotations, Metal-bindingSAAS annotations

Enzyme and pathway databases

BioCyciSRUB761659:GHC6-674-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunitImported (EC:1.2.4.1Imported)
Gene namesi
Name:acoAImported
Synonyms:pdhAImported
Ordered Locus Names:SRM_00667Imported
OrganismiSalinibacter ruber (strain M8)Imported
Taxonomic identifieri761659 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
ProteomesiUP000000933: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000029235.
KOiK11381.

Family and domain databases

Gene3Di3.40.50.920. 1 hit.
3.40.50.970. 2 hits.
InterProiIPR001017. DH_E1.
IPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
SSF52922. SSF52922. 1 hit.

Sequencei

Sequence statusi: Complete.

D5H6D3-1 [UniParc]FASTAAdd to Basket

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MPLFLRERTL RKRFQVGVTQ YAPPWRSWRP GERMGGRQAG TNGGRGSFGA    50
RRRVDSSSWL RPMATPEMQD TNDSDRDTQT NASSSPSGAA GGVKTAAEEI 100
PAENLMHGDG HAAIPQIPSI TSDGSIEVDE LSPADFEPDD LRQRLRTMML 150
SRRLDEKMMT LLKQGEGHFH IGCAGHEAVQ SALSRYSRPG EGPGHDWFCF 200
YYRDLCMALS LGMTTKEALL AHLAKADDPN SGGRQMPEHF GLKHLNVMTT 250
ASSVGAQFNP GVGFGFGIQQ RGEDSYVYIS CGDGATSQGD FHEALNWAAR 300
EQAPALFLVQ DNKYAISVPI EEQTAGGTPY KLAAGYEGLS RMRVDGTDFF 350
ASAAAAQAAI QHIRDGKGPV CLVADVVRLL PHSSSDDHTK YRTPDELEAD 400
RKIDPIDRLE AALIGEGILT EADAEALQEE VHEEVDEATE WAKRQDDPSP 450
ETAGDHVFFE GDLGLDYNSE DDLDEDAEPM VMVDAINRTL KEEMARDESV 500
IVYGEDVAGD KGGVFTATKD LTDEFGGDRC FNSPLAEGSI IGTAVGYAAS 550
GFTPVVEIQF ADYIWPAMQQ LRNQVAPFRY RSDGEWSCPM VVRVPCGGYI 600
HGGLCHSQNI ESIFGHTPGL KVALPSTAAD AKGLLATAIR SEDPVLFLEH 650
KALYRAASAR TPTPPEDYTL PFGKARIARE GSDMTIVTYG MMTQKSLNVA 700
EELEQEGVDV EVVDLRTIVP LDSETILESV RKTNRALVVY EDHEFIGFGA 750
ELSAQIADDA FTYLDAPIRR VAGEFTPIPF AHSLERSVLP SDEGILEAAR 800
DLAAF 805
Length:805
Mass (Da):87,796
Last modified:June 15, 2010 - v1
Checksum:iC47115C5BB317CB9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH23588.1.
RefSeqiWP_013061105.1. NC_014032.1.
YP_003570540.1. NC_014032.1.

Genome annotation databases

EnsemblBacteriaiCBH23588; CBH23588; SRM_00667.
GeneIDi8994115.
KEGGisrm:SRM_00667.
PATRICi35489230. VBISalRub49863_0622.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565814 Genomic DNA. Translation: CBH23588.1 .
RefSeqi WP_013061105.1. NC_014032.1.
YP_003570540.1. NC_014032.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH23588 ; CBH23588 ; SRM_00667 .
GeneIDi 8994115.
KEGGi srm:SRM_00667.
PATRICi 35489230. VBISalRub49863_0622.

Phylogenomic databases

HOGENOMi HOG000029235.
KOi K11381.

Enzyme and pathway databases

BioCyci SRUB761659:GHC6-674-MONOMER.

Family and domain databases

Gene3Di 3.40.50.920. 1 hit.
3.40.50.970. 2 hits.
InterProi IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view ]
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view ]
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
SSF52922. SSF52922. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
    Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
    ISME J. -:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: M8.
  2. "Genome sequence of Salinibacter ruber M8."
    Genoscope
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M8.

Entry informationi

Entry nameiD5H6D3_SALRM
AccessioniPrimary (citable) accession number: D5H6D3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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