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D5H6D3 (D5H6D3_SALRM) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.4.1 EMBL CBH23588.1
Gene names
Name:acoA EMBL CBH23588.1
Synonyms:pdhA EMBL CBH23588.1
Ordered Locus Names:SRM_00667 EMBL CBH23588.1
OrganismSalinibacter ruber (strain M8) [Complete proteome] [HAMAP] EMBL CBH23588.1
Taxonomic identifier761659 [NCBI]
Taxonomic lineageBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter

Protein attributes

Sequence length805 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D5H6D3 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: C47115C5BB317CB9

FASTA80587,796
        10         20         30         40         50         60 
MPLFLRERTL RKRFQVGVTQ YAPPWRSWRP GERMGGRQAG TNGGRGSFGA RRRVDSSSWL 

        70         80         90        100        110        120 
RPMATPEMQD TNDSDRDTQT NASSSPSGAA GGVKTAAEEI PAENLMHGDG HAAIPQIPSI 

       130        140        150        160        170        180 
TSDGSIEVDE LSPADFEPDD LRQRLRTMML SRRLDEKMMT LLKQGEGHFH IGCAGHEAVQ 

       190        200        210        220        230        240 
SALSRYSRPG EGPGHDWFCF YYRDLCMALS LGMTTKEALL AHLAKADDPN SGGRQMPEHF 

       250        260        270        280        290        300 
GLKHLNVMTT ASSVGAQFNP GVGFGFGIQQ RGEDSYVYIS CGDGATSQGD FHEALNWAAR 

       310        320        330        340        350        360 
EQAPALFLVQ DNKYAISVPI EEQTAGGTPY KLAAGYEGLS RMRVDGTDFF ASAAAAQAAI 

       370        380        390        400        410        420 
QHIRDGKGPV CLVADVVRLL PHSSSDDHTK YRTPDELEAD RKIDPIDRLE AALIGEGILT 

       430        440        450        460        470        480 
EADAEALQEE VHEEVDEATE WAKRQDDPSP ETAGDHVFFE GDLGLDYNSE DDLDEDAEPM 

       490        500        510        520        530        540 
VMVDAINRTL KEEMARDESV IVYGEDVAGD KGGVFTATKD LTDEFGGDRC FNSPLAEGSI 

       550        560        570        580        590        600 
IGTAVGYAAS GFTPVVEIQF ADYIWPAMQQ LRNQVAPFRY RSDGEWSCPM VVRVPCGGYI 

       610        620        630        640        650        660 
HGGLCHSQNI ESIFGHTPGL KVALPSTAAD AKGLLATAIR SEDPVLFLEH KALYRAASAR 

       670        680        690        700        710        720 
TPTPPEDYTL PFGKARIARE GSDMTIVTYG MMTQKSLNVA EELEQEGVDV EVVDLRTIVP 

       730        740        750        760        770        780 
LDSETILESV RKTNRALVVY EDHEFIGFGA ELSAQIADDA FTYLDAPIRR VAGEFTPIPF 

       790        800 
AHSLERSVLP SDEGILEAAR DLAAF 

« Hide

References

« Hide 'large scale' references
[1]"Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
ISME J. -:0-0(2010)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: M8.
[2]"Genome sequence of Salinibacter ruber M8."
Genoscope
Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FP565814 Genomic DNA. Translation: CBH23588.1.
RefSeqYP_003570540.1. NC_014032.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH23588; CBH23588; SRM_00667.
GeneID8994115.
KEGGsrm:SRM_00667.
PATRIC35489230. VBISalRub49863_0622.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000029235.
KOK11381.

Enzyme and pathway databases

BioCycSRUB761659:GHC6-674-MONOMER.

Family and domain databases

Gene3D3.40.50.920. 1 hit.
3.40.50.970. 2 hits.
InterProIPR001017. DH_E1.
IPR029061. THDP-binding.
IPR009014. Transketo_C/Pyr-ferredox_oxred.
IPR005475. Transketolase-like_Pyr-bd.
IPR005476. Transketolase_C.
[Graphical view]
PfamPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
PF02780. Transketolase_C. 1 hit.
[Graphical view]
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMSSF52518. SSF52518. 2 hits.
SSF52922. SSF52922. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5H6D3_SALRM
AccessionPrimary (citable) accession number: D5H6D3
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 11, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)