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D5H6D3

- D5H6D3_SALRM

UniProt

D5H6D3 - D5H6D3_SALRM

Protein
Submitted name:

2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit

Gene

acoA

Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. pyruvate dehydrogenase (acetyl-transferring) activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    OxidoreductaseImported

    Keywords - Ligandi

    MagnesiumSAAS annotation, Metal-bindingSAAS annotation

    Enzyme and pathway databases

    BioCyciSRUB761659:GHC6-674-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunitImported (EC:1.2.4.1Imported)
    Gene namesi
    Name:acoAImported
    Synonyms:pdhAImported
    Ordered Locus Names:SRM_00667Imported
    OrganismiSalinibacter ruber (strain M8)Imported
    Taxonomic identifieri761659 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
    ProteomesiUP000000933: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000029235.
    KOiK11381.

    Family and domain databases

    Gene3Di3.40.50.920. 1 hit.
    3.40.50.970. 2 hits.
    InterProiIPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR009014. Transketo_C/Pyr-ferredox_oxred.
    IPR005475. Transketolase-like_Pyr-bd.
    IPR005476. Transketolase_C.
    [Graphical view]
    PfamiPF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    PF02780. Transketolase_C. 1 hit.
    [Graphical view]
    SMARTiSM00861. Transket_pyr. 1 hit.
    [Graphical view]
    SUPFAMiSSF52518. SSF52518. 2 hits.
    SSF52922. SSF52922. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5H6D3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPLFLRERTL RKRFQVGVTQ YAPPWRSWRP GERMGGRQAG TNGGRGSFGA    50
    RRRVDSSSWL RPMATPEMQD TNDSDRDTQT NASSSPSGAA GGVKTAAEEI 100
    PAENLMHGDG HAAIPQIPSI TSDGSIEVDE LSPADFEPDD LRQRLRTMML 150
    SRRLDEKMMT LLKQGEGHFH IGCAGHEAVQ SALSRYSRPG EGPGHDWFCF 200
    YYRDLCMALS LGMTTKEALL AHLAKADDPN SGGRQMPEHF GLKHLNVMTT 250
    ASSVGAQFNP GVGFGFGIQQ RGEDSYVYIS CGDGATSQGD FHEALNWAAR 300
    EQAPALFLVQ DNKYAISVPI EEQTAGGTPY KLAAGYEGLS RMRVDGTDFF 350
    ASAAAAQAAI QHIRDGKGPV CLVADVVRLL PHSSSDDHTK YRTPDELEAD 400
    RKIDPIDRLE AALIGEGILT EADAEALQEE VHEEVDEATE WAKRQDDPSP 450
    ETAGDHVFFE GDLGLDYNSE DDLDEDAEPM VMVDAINRTL KEEMARDESV 500
    IVYGEDVAGD KGGVFTATKD LTDEFGGDRC FNSPLAEGSI IGTAVGYAAS 550
    GFTPVVEIQF ADYIWPAMQQ LRNQVAPFRY RSDGEWSCPM VVRVPCGGYI 600
    HGGLCHSQNI ESIFGHTPGL KVALPSTAAD AKGLLATAIR SEDPVLFLEH 650
    KALYRAASAR TPTPPEDYTL PFGKARIARE GSDMTIVTYG MMTQKSLNVA 700
    EELEQEGVDV EVVDLRTIVP LDSETILESV RKTNRALVVY EDHEFIGFGA 750
    ELSAQIADDA FTYLDAPIRR VAGEFTPIPF AHSLERSVLP SDEGILEAAR 800
    DLAAF 805
    Length:805
    Mass (Da):87,796
    Last modified:June 15, 2010 - v1
    Checksum:iC47115C5BB317CB9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP565814 Genomic DNA. Translation: CBH23588.1.
    RefSeqiWP_013061105.1. NC_014032.1.
    YP_003570540.1. NC_014032.1.

    Genome annotation databases

    EnsemblBacteriaiCBH23588; CBH23588; SRM_00667.
    GeneIDi8994115.
    KEGGisrm:SRM_00667.
    PATRICi35489230. VBISalRub49863_0622.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP565814 Genomic DNA. Translation: CBH23588.1 .
    RefSeqi WP_013061105.1. NC_014032.1.
    YP_003570540.1. NC_014032.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBH23588 ; CBH23588 ; SRM_00667 .
    GeneIDi 8994115.
    KEGGi srm:SRM_00667.
    PATRICi 35489230. VBISalRub49863_0622.

    Phylogenomic databases

    HOGENOMi HOG000029235.
    KOi K11381.

    Enzyme and pathway databases

    BioCyci SRUB761659:GHC6-674-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.920. 1 hit.
    3.40.50.970. 2 hits.
    InterProi IPR001017. DH_E1.
    IPR029061. THDP-binding.
    IPR009014. Transketo_C/Pyr-ferredox_oxred.
    IPR005475. Transketolase-like_Pyr-bd.
    IPR005476. Transketolase_C.
    [Graphical view ]
    Pfami PF00676. E1_dh. 1 hit.
    PF02779. Transket_pyr. 1 hit.
    PF02780. Transketolase_C. 1 hit.
    [Graphical view ]
    SMARTi SM00861. Transket_pyr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF52518. SSF52518. 2 hits.
    SSF52922. SSF52922. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
      Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
      ISME J. -:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: M8.
    2. "Genome sequence of Salinibacter ruber M8."
      Genoscope
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M8Imported.

    Entry informationi

    Entry nameiD5H6D3_SALRM
    AccessioniPrimary (citable) accession number: D5H6D3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3