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D5H4R6

- D5H4R6_SALRM

UniProt

D5H4R6 - D5H4R6_SALRM

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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Note: Magnesium.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei143 – 1431UniRule annotation
Active sitei578 – 5781UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, PyruvateImported

Enzyme and pathway databases

BioCyciSRUB761659:GHC6-105-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotationImported
Ordered Locus Names:SRM_00100Imported
OrganismiSalinibacter ruber (strain M8)Imported
Taxonomic identifieri761659 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
ProteomesiUP000000933: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
PhylomeDBiD5H4R6.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5H4R6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLGHIAEEQS GEALFEHVEG LRALCKAAEQ EDAPEKREEA AERIAALDQD
60 70 80 90 100
TLERLLHVYT TFFHLVNQAE QQEIIRINRE RARQSGPSEW PLGPGDGPGA
110 120 130 140 150
DGAEPRPQSI DAAVADLKAE GYTADEVVAF FRQLDIQPTL TAHPTEARRR
160 170 180 190 200
SVLRKEQHIA DLLSTLRRPD ATPDERAETL DRLYSQVAFL LGTDEVRAER
210 220 230 240 250
PTVREEVEQG HYFLHGSIWD TIPAIHRDVQ QALRRHYDAT AELPAFLQYR
260 270 280 290 300
SWIGSDRDGN PNVTADVTRW TVARQRRTTL EHYLDEIDEL RDDLSISTRQ
310 320 330 340 350
LTVSDALEAS LEADAEEIAL PDDVRRQYQR EPYRLKLCYI EERLRGLLDR
360 370 380 390 400
IDATDVAAMA GAYTADDLLA DLDLIAESLQ GHGFEDAAQS GQLHRLRSLV
410 420 430 440 450
KTFGFHLAAL DVRQHSGVHE DTVAALLDAG DVVDDYGALS EEEKLEVLSR
460 470 480 490 500
ELQNPRPLVS RHADLPADAA ELMEVFGVLR AMHAVDPDIV GSYVVSMTHT
510 520 530 540 550
VSDLLEPMLL AKEAGLGAVV DGSYRCPLDV VPLFETIEDL DAADDRMKTL
560 570 580 590 600
FTHPVYAAQL EGRDGFQEIM LGYSDSNKDG GYWMANWALH KAIHALGVVC
610 620 630 640 650
DEHDVDLRLF HGRGGTVGRG GGHTSQAIRA LPPVVHNGRI RMTEQGEIIS
660 670 680 690 700
FRYALPDIAR RHVEQIVNAT LTATARAQNT PAPENPLLAD KVSMESDVVA
710 720 730 740 750
LMDRLAEEGM SAYRAFIDDP EGWQWYTAAT PIEHISRLPI ASRPVSRASA
760 770 780 790 800
GEQVEFENLR AIPWVFAWTQ TRYIAPGWYG TGQGLATLLE DEPDARDTLR
810 820 830 840 850
DLYENWPFFR TVLDSAQREM ARARLPIAER YDALAEVETS FHAPIVDDYE
860 870 880 890 900
RAESAILEIT DQAALFDGNP VLKKSIELRN PYTDVLNLIQ IELLKRYRAS
910 920
TDDAEQETLR EAIFLSINGV AAAMQSTG
Length:928
Mass (Da):103,680
Last modified:June 15, 2010 - v1
Checksum:i8E42493D0833BFCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP565814 Genomic DNA. Translation: CBH23021.1.
RefSeqiWP_013060596.1. NC_014032.1.
YP_003569973.1. NC_014032.1.

Genome annotation databases

EnsemblBacteriaiCBH23021; CBH23021; SRM_00100.
GeneIDi8993743.
KEGGisrm:SRM_00100.
PATRICi35488184. VBISalRub49863_0101.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FP565814 Genomic DNA. Translation: CBH23021.1 .
RefSeqi WP_013060596.1. NC_014032.1.
YP_003569973.1. NC_014032.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH23021 ; CBH23021 ; SRM_00100 .
GeneIDi 8993743.
KEGGi srm:SRM_00100.
PATRICi 35488184. VBISalRub49863_0101.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
PhylomeDBi D5H4R6.

Enzyme and pathway databases

BioCyci SRUB761659:GHC6-105-MONOMER.

Family and domain databases

HAMAPi MF_00595. PEPcase_type1.
InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 1 hit.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
    Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
    ISME J. -:0-0(2010)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: M8.
  2. "Genome sequence of Salinibacter ruber M8."
    Genoscope
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M8Imported.

Entry informationi

Entry nameiD5H4R6_SALRM
AccessioniPrimary (citable) accession number: D5H4R6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: November 26, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3