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D5H4R6

- D5H4R6_SALRM

UniProt

D5H4R6 - D5H4R6_SALRM

Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Salinibacter ruber (strain M8)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotationSAAS annotation

    Catalytic activityi

    Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

    Cofactori

    Magnesium.UniRule annotationSAAS annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei143 – 1431UniRule annotation
    Active sitei578 – 5781UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbon fixation Source: UniProtKB-HAMAP
    2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
    3. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbon dioxide fixationUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, PyruvateImported

    Enzyme and pathway databases

    BioCyciSRUB761659:GHC6-105-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Phosphoenolpyruvate carboxylaseUniRule annotation (EC:4.1.1.31UniRule annotation)
    Short name:
    PEPCUniRule annotation
    Short name:
    PEPCaseUniRule annotation
    Gene namesi
    Name:ppcUniRule annotationImported
    Ordered Locus Names:SRM_00100Imported
    OrganismiSalinibacter ruber (strain M8)Imported
    Taxonomic identifieri761659 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesBacteroidetes Order II. Incertae sedisRhodothermaceaeSalinibacter
    ProteomesiUP000000933: Chromosome

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the PEPCase type 1 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000238647.
    KOiK01595.
    PhylomeDBiD5H4R6.

    Family and domain databases

    HAMAPiMF_00595. PEPcase_type1.
    InterProiIPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view]
    PfamiPF00311. PEPcase. 1 hit.
    [Graphical view]
    PRINTSiPR00150. PEPCARBXLASE.
    SUPFAMiSSF51621. SSF51621. 1 hit.
    PROSITEiPS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D5H4R6-1 [UniParc]FASTAAdd to Basket

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    MLGHIAEEQS GEALFEHVEG LRALCKAAEQ EDAPEKREEA AERIAALDQD    50
    TLERLLHVYT TFFHLVNQAE QQEIIRINRE RARQSGPSEW PLGPGDGPGA 100
    DGAEPRPQSI DAAVADLKAE GYTADEVVAF FRQLDIQPTL TAHPTEARRR 150
    SVLRKEQHIA DLLSTLRRPD ATPDERAETL DRLYSQVAFL LGTDEVRAER 200
    PTVREEVEQG HYFLHGSIWD TIPAIHRDVQ QALRRHYDAT AELPAFLQYR 250
    SWIGSDRDGN PNVTADVTRW TVARQRRTTL EHYLDEIDEL RDDLSISTRQ 300
    LTVSDALEAS LEADAEEIAL PDDVRRQYQR EPYRLKLCYI EERLRGLLDR 350
    IDATDVAAMA GAYTADDLLA DLDLIAESLQ GHGFEDAAQS GQLHRLRSLV 400
    KTFGFHLAAL DVRQHSGVHE DTVAALLDAG DVVDDYGALS EEEKLEVLSR 450
    ELQNPRPLVS RHADLPADAA ELMEVFGVLR AMHAVDPDIV GSYVVSMTHT 500
    VSDLLEPMLL AKEAGLGAVV DGSYRCPLDV VPLFETIEDL DAADDRMKTL 550
    FTHPVYAAQL EGRDGFQEIM LGYSDSNKDG GYWMANWALH KAIHALGVVC 600
    DEHDVDLRLF HGRGGTVGRG GGHTSQAIRA LPPVVHNGRI RMTEQGEIIS 650
    FRYALPDIAR RHVEQIVNAT LTATARAQNT PAPENPLLAD KVSMESDVVA 700
    LMDRLAEEGM SAYRAFIDDP EGWQWYTAAT PIEHISRLPI ASRPVSRASA 750
    GEQVEFENLR AIPWVFAWTQ TRYIAPGWYG TGQGLATLLE DEPDARDTLR 800
    DLYENWPFFR TVLDSAQREM ARARLPIAER YDALAEVETS FHAPIVDDYE 850
    RAESAILEIT DQAALFDGNP VLKKSIELRN PYTDVLNLIQ IELLKRYRAS 900
    TDDAEQETLR EAIFLSINGV AAAMQSTG 928
    Length:928
    Mass (Da):103,680
    Last modified:June 15, 2010 - v1
    Checksum:i8E42493D0833BFCA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP565814 Genomic DNA. Translation: CBH23021.1.
    RefSeqiWP_013060596.1. NC_014032.1.
    YP_003569973.1. NC_014032.1.

    Genome annotation databases

    EnsemblBacteriaiCBH23021; CBH23021; SRM_00100.
    GeneIDi8993743.
    KEGGisrm:SRM_00100.
    PATRICi35488184. VBISalRub49863_0101.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FP565814 Genomic DNA. Translation: CBH23021.1 .
    RefSeqi WP_013060596.1. NC_014032.1.
    YP_003569973.1. NC_014032.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBH23021 ; CBH23021 ; SRM_00100 .
    GeneIDi 8993743.
    KEGGi srm:SRM_00100.
    PATRICi 35488184. VBISalRub49863_0101.

    Phylogenomic databases

    HOGENOMi HOG000238647.
    KOi K01595.
    PhylomeDBi D5H4R6.

    Enzyme and pathway databases

    BioCyci SRUB761659:GHC6-105-MONOMER.

    Family and domain databases

    HAMAPi MF_00595. PEPcase_type1.
    InterProi IPR021135. PEP_COase.
    IPR018129. PEP_COase_AS.
    IPR022805. PEP_COase_bac/pln-type.
    IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
    [Graphical view ]
    Pfami PF00311. PEPcase. 1 hit.
    [Graphical view ]
    PRINTSi PR00150. PEPCARBXLASE.
    SUPFAMi SSF51621. SSF51621. 1 hit.
    PROSITEi PS00781. PEPCASE_1. 1 hit.
    PS00393. PEPCASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains."
      Pena A., Teeling H., Huerta-Cepas J., Santos F., Yarza P., Brito-Echeverria J., Lucio M., Schmitt-Kopplin P., Meseguer I., Schenowitz C., Dossat C., Barbe V., Dopazo J., Rossello-Mora R., Schuler M., Glockner F.O., Amann R., Gabaldon T., Anton J.
      ISME J. -:0-0(2010)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: M8.
    2. "Genome sequence of Salinibacter ruber M8."
      Genoscope
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M8Imported.

    Entry informationi

    Entry nameiD5H4R6_SALRM
    AccessioniPrimary (citable) accession number: D5H4R6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3