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D5GYK5 (D5GYK5_LACCS) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:lacM EMBL CBL50864.1
Ordered Locus Names:LCRIS_01417 EMBL CBL50864.1
OrganismLactobacillus crispatus (strain ST1) [Complete proteome] [HAMAP] EMBL CBL50864.1
Taxonomic identifier748671 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length316 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS014718

Ontologies

Keywords
   Molecular functionGlycosidase SAAS SAAS014718
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentbeta-galactosidase complex

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: InterPro

carbohydrate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5GYK5 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 9AB83057DD4AA619

FASTA31635,587
        10         20         30         40         50         60 
MAYTNNLHVV YGEASLGVNG QDFAYLFSYE RGGLESLKIK DKEWLYRTPT PTFWRATTDN 

        70         80         90        100        110        120 
DRGSGFNQKA AQWLGADMFT KCVGIHVQVD DHQFDELPIA PINNQFSNQE FAHEVKVAFD 

       130        140        150        160        170        180 
YETLTTPATK VKIIYNINDA GHMTITMHYF GKKGLPPLPV IGMRFIMPTK AKSFDYTGLS 

       190        200        210        220        230        240 
GETYPDRMAG AERGTFHIDG LPVTKYLVPQ ENGMHMQTNE LVITRNSTQN NADKDGDFSL 

       250        260        270        280        290        300 
KITQTKQPFN FSLLPYTAEE LENATHIEEL PLARRSVLVI AGAVRGVGGI DSWGSDVEEQ 

       310 
YHIDPEQDHE FSFTLN 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of Lactobacillus crispatus ST1."
Ojala T., Kuparinen V., Koskinen J.P., Alatalo E., Holm L., Auvinen P., Edelman S., Westerlund-Wikstrom B., Korhonen T.K., Paulin L., Kankainen M.
J. Bacteriol. 192:3547-3548(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ST1.
[2]"Genome Sequence of Lactobacillus crispatus ST1."
Ojala T., Kuparinen V., Koskinen J.P., Alatalo E., Holm L., Auvinen P., Edelman S., Westerlund-Wikstroem B., Korhonen T.K., Paulin L., Kankainen M.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ST1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN692037 Genomic DNA. Translation: CBL50864.1.
RefSeqYP_003601889.1. NC_014106.1.

3D structure databases

ProteinModelPortalD5GYK5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBL50864; CBL50864; LCRIS_01417.
GeneID9107336.
KEGGlcr:LCRIS_01417.
PATRIC37241653. VBILacCri149433_1391.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000111247.
KOK01190.
OMAQWLGADM.

Enzyme and pathway databases

BioCycLCRI748671:GIX1-1482-MONOMER.

Family and domain databases

Gene3D2.70.98.10. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR014718. Glyco_hydro-type_carb-bd_sub.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
[Graphical view]
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF74650. SSF74650. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5GYK5_LACCS
AccessionPrimary (citable) accession number: D5GYK5
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)