D5GYK5 (D5GYK5_LACCS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-galactosidase small subunit EMBL CBL50864.1

Gene names

Name:	lacM EMBL CBL50864.1
Ordered Locus Names:	LCRIS_01417

Organism

Lactobacillus crispatus (strain ST1) [Complete proteome] [HAMAP] EMBL CBL50864.1

Taxonomic identifier

748671 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus › Lactobacillus crispatus

Protein attributes

Sequence length	316 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS011013

Ontologies

Keywords
Molecular function	Glycosidase SAAS SAAS014718 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	beta-galactosidase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	beta-galactosidase activity Inferred from electronic annotation. Source: InterPro carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5GYK5 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 9AB83057DD4AA619	FASTA	316	35,587
	10 20 30 40 50 60 MAYTNNLHVV YGEASLGVNG QDFAYLFSYE RGGLESLKIK DKEWLYRTPT PTFWRATTDN 70 80 90 100 110 120 DRGSGFNQKA AQWLGADMFT KCVGIHVQVD DHQFDELPIA PINNQFSNQE FAHEVKVAFD 130 140 150 160 170 180 YETLTTPATK VKIIYNINDA GHMTITMHYF GKKGLPPLPV IGMRFIMPTK AKSFDYTGLS 190 200 210 220 230 240 GETYPDRMAG AERGTFHIDG LPVTKYLVPQ ENGMHMQTNE LVITRNSTQN NADKDGDFSL 250 260 270 280 290 300 KITQTKQPFN FSLLPYTAEE LENATHIEEL PLARRSVLVI AGAVRGVGGI DSWGSDVEEQ 310 YHIDPEQDHE FSFTLN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Genome sequence of Lactobacillus crispatus ST1." Ojala T., Kuparinen V., Koskinen J.P., Alatalo E., Holm L., Auvinen P., Edelman S., Westerlund-Wikstrom B., Korhonen T.K., Paulin L., Kankainen M. J. Bacteriol. 192:3547-3548(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ST1.
[2]	"Genome Sequence of Lactobacillus crispatus ST1." Ojala T., Kuparinen V., Koskinen J.P., Alatalo E., Holm L., Auvinen P., Edelman S., Westerlund-Wikstroem B., Korhonen T.K., Paulin L., Kankainen M. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: ST1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN692037 Genomic DNA. Translation: CBL50864.1.
RefSeq	YP_003601889.1. NC_014106.1.
3D structure databases
ProteinModelPortal	D5GYK5.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CBL50864; CBL50864; LCRIS_01417.
GeneID	9107336.
KEGG	lcr:LCRIS_01417.
PATRIC	37241653. VBILacCri149433_1391.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000111247.
KO	K01190.
OMA	KEWLYRT.
Enzyme and pathway databases
BioCyc	LCRI748671:GIX1-1482-MONOMER.
Family and domain databases
Gene3D	2.70.98.10. 1 hit.
InterPro	IPR004199. B-gal_small/dom_5. IPR011013. Gal_mutarotase_SF_dom. IPR014718. Glyco_hydro-type_carb-bd_sub. [Graphical view]
Pfam	PF02929. Bgal_small_N. 1 hit. [Graphical view]
SMART	SM01038. Bgal_small_N. 1 hit. [Graphical view]
SUPFAM	SSF74650. Gal_mut_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5GYK5_LACCS

Accession

Primary (citable) accession number: D5GYK5

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)