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D5GLS4

- D5GLS4_TUBMM

UniProt

D5GLS4 - D5GLS4_TUBMM

Protein
Submitted name:

Whole genome shotgun sequence assembly, scaffold_7, strain Mel28

Gene

GSTUM_00010383001

Organism
Tuber melanosporum (strain Mel28) (Perigord black truffle)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Whole genome shotgun sequence assembly, scaffold_7, strain Mel28Imported
    Gene namesi
    ORF Names:GSTUM_00010383001Imported
    OrganismiTuber melanosporum (strain Mel28) (Perigord black truffle)Imported
    Taxonomic identifieri656061 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaPezizomycetesPezizalesTuberaceaeTuber
    ProteomesiUP000006911: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliD5GLS4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiGKGQFEN.
    OrthoDBiEOG7WHHK6.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D5GLS4-1 [UniParc]FASTAAdd to Basket

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    MSEKLDGVRA CWDGETFRSR EGNPFYAPAW FTKRMPKDIT LDGELFTTRG    50
    GFQDCVSIVR TQNKPDAWKF SVTYQIFDIP SMGHKPFEER IAYLKDLFGR 100
    LRIRWVHVLE HTICKGRRHL FDTLDKVTAN KGEGLMLREP GSLYINNRSK 150
    TLMKVKRFFD ADAIVRGHER GSGKNSNCTG ALRVEMLDDN GEPTGKFFKI 200
    GTGLTDKQRQ NPPKIGIIVI YRFQELSRDG NPRFPAHMVF VMNKRATRLA 250
    NAENAEESNR MSSKSVEADF RILLKWSKRC APAELARFRQ DERGANYHKG 300
    VFLRIQRCYC GEERCGSTLI NNDKLFSPLF IYCL 334
    Length:334
    Mass (Da):38,513
    Last modified:June 15, 2010 - v1
    Checksum:iBA87F14D56DB3C2F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN430351 Genomic DNA. Translation: CAZ85491.1.
    RefSeqiXP_002841300.1. XM_002841254.1.
    UniGeneiTme.1238.

    Genome annotation databases

    EnsemblFungiiCAZ85491; CAZ85491; GSTUM_00010383001.
    GeneIDi9186475.
    KEGGitml:GSTUM_00010383001.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FN430351 Genomic DNA. Translation: CAZ85491.1 .
    RefSeqi XP_002841300.1. XM_002841254.1.
    UniGenei Tme.1238.

    3D structure databases

    ProteinModelPortali D5GLS4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii CAZ85491 ; CAZ85491 ; GSTUM_00010383001 .
    GeneIDi 9186475.
    KEGGi tml:GSTUM_00010383001.

    Phylogenomic databases

    KOi K01971.
    OMAi GKGQFEN.
    OrthoDBi EOG7WHHK6.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Mel28Imported.

    Entry informationi

    Entry nameiD5GLS4_TUBMM
    AccessioniPrimary (citable) accession number: D5GLS4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3