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Protein

Alpha-amylase

Gene

GSTUM_00007852001

Organism
Tuber melanosporum (strain Mel28) (Perigord black truffle)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:GSTUM_00007852001Imported
OrganismiTuber melanosporum (strain Mel28) (Perigord black truffle)Imported
Taxonomic identifieri656061 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaPezizomycetesPezizalesTuberaceaeTuber
ProteomesiUP000006911: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

InParanoidiD5GHG3.
KOiK01176.
OMAiIQNDDHD.
OrthoDBiEOG75J0X2.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR005036. CBM_21.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03370. CBM_21. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 2 hits.
PROSITEiPS51159. CBM21. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5GHG3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFILQLLMFV ALAVATPLRK DATQVSLISW TFTDNVLSGS VRIQNIAYRK
60 70 80 90 100
VVTVFYAVGS TWSDSQKISA TWSVQGTDGY EIWTFSGTAT GATQFHIKYD
110 120 130 140 150
VSGTSYYDPG NTDNYQVPTT TGAATSTTTI PPTSVGSGTT ATPTIPTTTT
160 170 180 190 200
TCTGTPVSIG PVDPSIPPAI IPSKIPSEPV PTVPSGCGNW NGLDKCANGV
210 220 230 240 250
YTFPDSAERR RWQTPPEGGD GYFKSFQDYR NLVGYADIQY SSDRTRAVVV
260 270 280 290 300
VNAASRTGEC LKYSFNGVGQ SSNTFQVNSG FAGQLEITVT GSDGSSLVLE
310 320 330 340 350
PLNFFWQNAP LSAAQSTFSD GQKGGIIELF GWPYDDVAKE CAFLGKAGWM
360 370 380 390 400
GVKIWPATEH VWGSHYYELD NQFRPWYLSY QPVSYRLHSR MGTRAQLRAM
410 420 430 440 450
IQACRTEGVR VYADAVINHM VGQGSDIQNH RVSSCAKYSG RNATDGSPYF
460 470 480 490 500
TSGNTYLLSP YTGTRPTLEF PSVPYGPTDF HCERTLNSWT DGQVITKGWL
510 520 530 540 550
LGLTDLNTEK PYVQDRIATY LVDLLSIGFT GFRVDAAKHI GPSSVAQILG
560 570 580 590 600
RVKAKMGGSM PADWITWLEV IMGGESSLLA CSGGEWSWYT NLDNQLKAAG
610 620 630 640 650
LSDSEVTKVK VWSSDYPKEM PICGSWIIPA SRFAIQNDDH DQQNPGSSSR
660 670 680 690 700
DMANKGSVLI KDKDAAKHRG FEVQLFSRTD ANWHIKLVLS SYSFMDNGAS
710 720 730 740 750
GFPDGHSDCS LYTGNQAISG CLGVPRDTAY VADACSYTIS PGKYTRVHRD
760 770
LPIINAMRAW VGLGSTTAAA LGISGC
Length:776
Mass (Da):84,259
Last modified:June 15, 2010 - v1
Checksum:iC6E8FCC77D63D759
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN430318 Genomic DNA. Translation: CAZ83956.1.
RefSeqiXP_002839765.1. XM_002839719.1.
UniGeneiTme.2755.

Genome annotation databases

EnsemblFungiiCAZ83956; CAZ83956; GSTUM_00007852001.
GeneIDi9183601.
KEGGitml:GSTUM_00007852001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN430318 Genomic DNA. Translation: CAZ83956.1.
RefSeqiXP_002839765.1. XM_002839719.1.
UniGeneiTme.2755.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAZ83956; CAZ83956; GSTUM_00007852001.
GeneIDi9183601.
KEGGitml:GSTUM_00007852001.

Phylogenomic databases

InParanoidiD5GHG3.
KOiK01176.
OMAiIQNDDHD.
OrthoDBiEOG75J0X2.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR005036. CBM_21.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03370. CBM_21. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 2 hits.
PROSITEiPS51159. CBM21. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Mel28Imported.

Entry informationi

Entry nameiD5GHG3_TUBMM
AccessioniPrimary (citable) accession number: D5GHG3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: January 7, 2015
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.