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Protein
Submitted name:

Whole genome shotgun sequence assembly, scaffold_38, strain Mel28

Gene

GSTUM_00007613001

Organism
Tuber melanosporum (strain Mel28) (Perigord black truffle)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. GTPase activity Source: InterPro
  2. GTP binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Whole genome shotgun sequence assembly, scaffold_38, strain Mel28Imported
Gene namesi
ORF Names:GSTUM_00007613001Imported
OrganismiTuber melanosporum (strain Mel28) (Perigord black truffle)Imported
Taxonomic identifieri656061 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaPezizomycetesPezizalesTuberaceaeTuber
ProteomesiUP000006911: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliD5GGY2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiD5GGY2.
KOiK02358.
OMAiARRVEIV.
OrthoDBiEOG7GXPMZ.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

D5GGY2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MDGAIIVVAA SDGQMPQTRE HLLLARQVGV QRIVVFVNKV DALEDAEMLE
60 70 80 90 100
LVEMEMRELL STYGFDGDET PIVMGSALCA LEGRRPEIGE QKISELLDAV
110 120 130 140 150
DTWIPTPQRD LDKPFLMAIE DVFSIPGRGT VATGRVERGI LKRGEEVELV
160 170 180 190 200
GYEDVPIKTI VTGLETFKKE LDSAQAGDNS GLLLRGIKRD QVRRGMVVVK
210 220 230 240 250
PGTTKAHNKF LASLYVLTKE EGGRHTGFHG NYRPQMFLRT SDIPVTIDLP
260 270 280 290 300
EGSTDDSHKM IMPGDNLEVQ CTIFKPMAVD PGQRFNLREG GRTVATGLVT

RIL
Length:303
Mass (Da):33,429
Last modified:June 15, 2010 - v1
Checksum:i9267823F132F7DA7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN430297 Genomic DNA. Translation: CAZ83775.1.
RefSeqiXP_002839584.1. XM_002839538.1.

Genome annotation databases

EnsemblFungiiCAZ83775; CAZ83775; GSTUM_00007613001.
GeneIDi9185029.
KEGGitml:GSTUM_00007613001.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN430297 Genomic DNA. Translation: CAZ83775.1.
RefSeqiXP_002839584.1. XM_002839538.1.

3D structure databases

ProteinModelPortaliD5GGY2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAZ83775; CAZ83775; GSTUM_00007613001.
GeneIDi9185029.
KEGGitml:GSTUM_00007613001.

Phylogenomic databases

InParanoidiD5GGY2.
KOiK02358.
OMAiARRVEIV.
OrthoDBiEOG7GXPMZ.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Mel28Imported.

Entry informationi

Entry nameiD5GGY2_TUBMM
AccessioniPrimary (citable) accession number: D5GGY2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: January 7, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.