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Protein

Histone H2B

Gene

GSTUM_00000270001

Organism
Tuber melanosporum (strain Mel28) (Perigord black truffle)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionDNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Histone H2BUniRule annotation
Gene namesi
ORF Names:GSTUM_00000270001Imported
OrganismiTuber melanosporum (strain Mel28) (Perigord black truffle)Imported
Taxonomic identifieri656061 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaPezizomycetesPezizalesTuberaceaeTuber
Proteomesi
  • UP000006911 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chromosome, Nucleosome coreUniRule annotationSAAS annotation, NucleusUniRule annotationSAAS annotation

Interactioni

Subunit structurei

The nucleosome is a histone octamer containing two molecules each of H2A, H2B, H3 and H4 assembled in one H3-H4 heterotetramer and two H2A-H2B heterodimers. The octamer wraps approximately 147 bp of DNA.UniRule annotation

GO - Molecular functioni

Protein-protein interaction databases

STRINGi39416.CAZ79647

Structurei

3D structure databases

ProteinModelPortaliD5G562
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 112HistoneInterPro annotationAdd BLAST111

Sequence similaritiesi

Belongs to the histone H2B family.UniRule annotationSAAS annotation

Phylogenomic databases

InParanoidiD5G562
KOiK11252
OMAiDIFDRMA
OrthoDBiEOG092C5QTV

Family and domain databases

Gene3Di1.10.20.10, 1 hit
InterProiView protein in InterPro
IPR009072 Histone-fold
IPR007125 Histone_H2A/H2B/H3
IPR000558 Histone_H2B
PANTHERiPTHR23428 PTHR23428, 1 hit
PfamiView protein in Pfam
PF00125 Histone, 1 hit
PRINTSiPR00621 HISTONEH2B
SMARTiView protein in SMART
SM00427 H2B, 1 hit
SUPFAMiSSF47113 SSF47113, 1 hit
PROSITEiView protein in PROSITE
PS00357 HISTONE_H2B, 1 hit

Sequencei

Sequence statusi: Complete.

D5G562-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPPKAAEKKP TTAGKAPAGK APEKKEAGKK TAAASGEKKK RSKTRKETYS
60 70 80 90 100
SYIYKVLKQV HPDTGISNRA MSILNSFVND IFERVATEAS KLAAYNKKST
110 120 130
ISSREIQTSV RLILPGELAK HAVSEGTKAV TKYSSSTK
Length:138
Mass (Da):14,914
Last modified:June 15, 2010 - v1
Checksum:i10ABC92140CE8B53
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN429996 Genomic DNA Translation: CAZ79647.1
RefSeqiXP_002835490.1, XM_002835444.1
UniGeneiTme.6937

Genome annotation databases

EnsemblFungiiCAZ79647; CAZ79647; GSTUM_00000270001
GeneIDi9186345
KEGGitml:GSTUM_00000270001

Similar proteinsi

Entry informationi

Entry nameiD5G562_TUBMM
AccessioniPrimary (citable) accession number: D5G562
Entry historyiIntegrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: March 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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