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Protein

Superoxide dismutase

Gene

sodB

Organism
Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi28Divalent metal cationUniRule annotation1
Metal bindingi75Divalent metal cationUniRule annotation1
Metal bindingi159Divalent metal cationUniRule annotation1
Metal bindingi163Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotationImported
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciPRUM264731:G1GHW-1801-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:PRU_1727Imported
OrganismiPrevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)Imported
Taxonomic identifieri264731 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella
Proteomesi
  • UP000000927 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264731.PRU_1727

Structurei

3D structure databases

ProteinModelPortaliD5ETR8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 81Sod_Fe_NInterPro annotationAdd BLAST79
Domaini91 – 192Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013584
KOiK04564
OMAiYEGWKGE
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

D5ETR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKFELMALP YAPEALEPVI SRETIAFHHG KHLAAYVNNL NGLLEGNPMA
60 70 80 90 100
DLALEEIVCQ ATGGILNNAG QILNHELYFG QFTAPKADNQ PVGKVAEAIV
110 120 130 140 150
RDFGSFEAFK EAFQKAGATL FGSGWVWLSA DKDGKLVITQ ETNAANPVQK
160 170 180 190
GLKPLLTFDV WEHAYYLDYQ NRRPDHLAAL WQIIDWQVIE KRFG
Length:194
Mass (Da):21,585
Last modified:June 15, 2010 - v1
Checksum:iB74D04E781D6E158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002006 Genomic DNA Translation: ADE83681.1
RefSeqiWP_013065663.1, NC_014033.1

Genome annotation databases

EnsemblBacteriaiADE83681; ADE83681; PRU_1727
GeneIDi31501278
KEGGipru:PRU_1727

Similar proteinsi

Entry informationi

Entry nameiD5ETR8_PRER2
AccessioniPrimary (citable) accession number: D5ETR8
Entry historyiIntegrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: March 28, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health