Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Superoxide dismutase

Gene

sodB

Organism
Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciPRUM264731:GHX6-1671-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodBImported
Ordered Locus Names:PRU_1727Imported
OrganismiPrevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23)Imported
Taxonomic identifieri264731 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesBacteroidiaBacteroidalesPrevotellaceaePrevotella
ProteomesiUP000000927 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi264731.PRU_1727.

Structurei

3D structure databases

ProteinModelPortaliD5ETR8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiGGGNKLP.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5ETR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKFELMALP YAPEALEPVI SRETIAFHHG KHLAAYVNNL NGLLEGNPMA
60 70 80 90 100
DLALEEIVCQ ATGGILNNAG QILNHELYFG QFTAPKADNQ PVGKVAEAIV
110 120 130 140 150
RDFGSFEAFK EAFQKAGATL FGSGWVWLSA DKDGKLVITQ ETNAANPVQK
160 170 180 190
GLKPLLTFDV WEHAYYLDYQ NRRPDHLAAL WQIIDWQVIE KRFG
Length:194
Mass (Da):21,585
Last modified:June 15, 2010 - v1
Checksum:iB74D04E781D6E158
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002006 Genomic DNA. Translation: ADE83681.1.
RefSeqiWP_013065663.1. NC_014033.1.
YP_003575022.1. NC_014033.1.

Genome annotation databases

EnsemblBacteriaiADE83681; ADE83681; PRU_1727.
KEGGipru:PRU_1727.
PATRICi35497605. VBIPreRum14515_1681.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002006 Genomic DNA. Translation: ADE83681.1.
RefSeqiWP_013065663.1. NC_014033.1.
YP_003575022.1. NC_014033.1.

3D structure databases

ProteinModelPortaliD5ETR8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi264731.PRU_1727.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADE83681; ADE83681; PRU_1727.
KEGGipru:PRU_1727.
PATRICi35497605. VBIPreRum14515_1681.

Phylogenomic databases

HOGENOMiHOG000013584.
KOiK04564.
OMAiGGGNKLP.

Enzyme and pathway databases

BioCyciPRUM264731:GHX6-1671-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome analysis of Prevotella ruminicola and Prevotella bryantii: insights into their environmental niche."
    North American Consortium for Rumen Bacteria
    Purushe J., Fouts D.E., Morrison M., White B.A., Mackie R.I., Coutinho P.M., Henrissat B., Nelson K.E.
    Microb. Ecol. 60:721-729(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19189 / JCM 8958 / 23Imported.

Entry informationi

Entry nameiD5ETR8_PRER2
AccessioniPrimary (citable) accession number: D5ETR8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: June 24, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.