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D5EQ72

- D5EQ72_CORAD

UniProt

D5EQ72 - D5EQ72_CORAD

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Protein
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase
Gene
kduI, Caka_0816
Organism
Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate By similarity.UniRule annotationSAAS annotations

Catalytic activityi

5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.UniRule annotationSAAS annotations

Cofactori

Binds 1 zinc ion per subunit By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi194 – 1941Zinc By similarityUniRule annotation
Metal bindingi196 – 1961Zinc By similarityUniRule annotation
Metal bindingi201 – 2011Zinc By similarityUniRule annotation
Metal bindingi243 – 2431Zinc By similarityUniRule annotation

GO - Molecular functioni

  1. 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity Source: UniProtKB-HAMAP
  2. zinc ion binding Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. pectin catabolic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotations, ZincUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciCAKA583355:GI4D-823-MONOMER.
UniPathwayiUPA00545; UER00826.

Names & Taxonomyi

Protein namesi
Recommended name:
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomeraseUniRule annotation (EC:5.3.1.17UniRule annotation)
Alternative name(s):
5-keto-4-deoxyuronate isomerase
DKI isomerase
Gene namesi
Name:kduIUniRule annotation
Ordered Locus Names:Caka_0816Imported
OrganismiCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)Imported
Taxonomic identifieri583355 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaePuniceicoccalesPuniceicoccaceaeCoraliomargarita
ProteomesiUP000000925: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5EQ72.

Family & Domainsi

Sequence similaritiesi

Belongs to the KduI family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000124379.
KOiK01815.
OMAiEIGHREA.

Family and domain databases

Gene3Di2.60.120.500. 1 hit.
2.60.120.520. 1 hit.
HAMAPiMF_00687. KduI.
InterProiIPR007045. KduI.
IPR021120. KduI/IolB_isomerase.
IPR027447. KduI_C.
IPR027449. KduI_N.
IPR011051. RmlC_Cupin.
[Graphical view]
PfamiPF04962. KduI. 1 hit.
[Graphical view]
PIRSFiPIRSF006625. KduI. 1 hit.
SUPFAMiSSF51182. SSF51182. 1 hit.

Sequencei

Sequence statusi: Complete.

D5EQ72-1 [UniParc]FASTAAdd to Basket

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MESRYATGIN EYKSMNTAQL RDAFLIDQLF KEDEVHLQYC ETDRTIVGSA    50
VPTSTELALE AGSALAAEYF CERRELGILN LGASGTVQVD GETYTLDTLD 100
CLYVGRGSRD IRFISASADQ PAQFYLASYP AHTSYPTTLT KRSAANPIQL 150
GDTHNANKRT IYQYIHEGGV QSCQLVMGIT ALEDGSVWNT MPAHTHERRT 200
EVYLYFNVDE DATVFHFMGT GDETRHITVH DKQAVISPAW SIHSGSGTRN 250
YSFAWCMGGE NQDFSDMQGI PIQALK 276
Length:276
Mass (Da):30,679
Last modified:June 15, 2010 - v1
Checksum:i5276FF77617822D5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001998 Genomic DNA. Translation: ADE53840.1.
RefSeqiWP_013042564.1. NC_014008.1.
YP_003548010.1. NC_014008.1.

Genome annotation databases

EnsemblBacteriaiADE53840; ADE53840; Caka_0816.
GeneIDi8957936.
KEGGicaa:Caka_0816.
PATRICi35442220. VBICorAka2911_0794.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001998 Genomic DNA. Translation: ADE53840.1 .
RefSeqi WP_013042564.1. NC_014008.1.
YP_003548010.1. NC_014008.1.

3D structure databases

ProteinModelPortali D5EQ72.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE53840 ; ADE53840 ; Caka_0816 .
GeneIDi 8957936.
KEGGi caa:Caka_0816.
PATRICi 35442220. VBICorAka2911_0794.

Phylogenomic databases

HOGENOMi HOG000124379.
KOi K01815.
OMAi EIGHREA.

Enzyme and pathway databases

UniPathwayi UPA00545 ; UER00826 .
BioCyci CAKA583355:GI4D-823-MONOMER.

Family and domain databases

Gene3Di 2.60.120.500. 1 hit.
2.60.120.520. 1 hit.
HAMAPi MF_00687. KduI.
InterProi IPR007045. KduI.
IPR021120. KduI/IolB_isomerase.
IPR027447. KduI_C.
IPR027449. KduI_N.
IPR011051. RmlC_Cupin.
[Graphical view ]
Pfami PF04962. KduI. 1 hit.
[Graphical view ]
PIRSFi PIRSF006625. KduI. 1 hit.
SUPFAMi SSF51182. SSF51182. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865.

Entry informationi

Entry nameiD5EQ72_CORAD
AccessioniPrimary (citable) accession number: D5EQ72
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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