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D5EQ72

- D5EQ72_CORAD

UniProt

D5EQ72 - D5EQ72_CORAD

Protein

4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase

Gene

kduI

Organism
Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (15 Jun 2010)
      Previous versions | rss
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    Functioni

    Catalyzes the isomerization of 5-dehydro-4-deoxy-D-glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate.UniRule annotationSAAS annotation

    Catalytic activityi

    5-dehydro-4-deoxy-D-glucuronate = 3-deoxy-D-glycero-2,5-hexodiulosonate.UniRule annotationSAAS annotation

    Cofactori

    Binds 1 zinc ion per subunit.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi194 – 1941ZincUniRule annotation
    Metal bindingi196 – 1961ZincUniRule annotation
    Metal bindingi201 – 2011ZincUniRule annotation
    Metal bindingi243 – 2431ZincUniRule annotation

    GO - Molecular functioni

    1. 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity Source: UniProtKB-HAMAP
    2. zinc ion binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. pectin catabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Ligandi

    Metal-bindingUniRule annotationSAAS annotation, ZincUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciCAKA583355:GI4D-823-MONOMER.
    UniPathwayiUPA00545; UER00826.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    4-deoxy-L-threo-5-hexosulose-uronate ketol-isomeraseUniRule annotation (EC:5.3.1.17UniRule annotation)
    Alternative name(s):
    5-keto-4-deoxyuronate isomeraseUniRule annotation
    DKI isomeraseUniRule annotation
    Gene namesi
    Name:kduIUniRule annotation
    Ordered Locus Names:Caka_0816Imported
    OrganismiCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)Imported
    Taxonomic identifieri583355 [NCBI]
    Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaePuniceicoccalesPuniceicoccaceaeCoraliomargarita
    ProteomesiUP000000925: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD5EQ72.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the KduI family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000124379.
    KOiK01815.
    OMAiEIGHREA.

    Family and domain databases

    Gene3Di2.60.120.500. 1 hit.
    2.60.120.520. 1 hit.
    HAMAPiMF_00687. KduI.
    InterProiIPR007045. KduI.
    IPR021120. KduI/IolB_isomerase.
    IPR027447. KduI_C.
    IPR027449. KduI_N.
    IPR011051. RmlC_Cupin.
    [Graphical view]
    PfamiPF04962. KduI. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006625. KduI. 1 hit.
    SUPFAMiSSF51182. SSF51182. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D5EQ72-1 [UniParc]FASTAAdd to Basket

    « Hide

    MESRYATGIN EYKSMNTAQL RDAFLIDQLF KEDEVHLQYC ETDRTIVGSA    50
    VPTSTELALE AGSALAAEYF CERRELGILN LGASGTVQVD GETYTLDTLD 100
    CLYVGRGSRD IRFISASADQ PAQFYLASYP AHTSYPTTLT KRSAANPIQL 150
    GDTHNANKRT IYQYIHEGGV QSCQLVMGIT ALEDGSVWNT MPAHTHERRT 200
    EVYLYFNVDE DATVFHFMGT GDETRHITVH DKQAVISPAW SIHSGSGTRN 250
    YSFAWCMGGE NQDFSDMQGI PIQALK 276
    Length:276
    Mass (Da):30,679
    Last modified:June 15, 2010 - v1
    Checksum:i5276FF77617822D5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001998 Genomic DNA. Translation: ADE53840.1.
    RefSeqiWP_013042564.1. NC_014008.1.
    YP_003548010.1. NC_014008.1.

    Genome annotation databases

    EnsemblBacteriaiADE53840; ADE53840; Caka_0816.
    GeneIDi8957936.
    KEGGicaa:Caka_0816.
    PATRICi35442220. VBICorAka2911_0794.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001998 Genomic DNA. Translation: ADE53840.1 .
    RefSeqi WP_013042564.1. NC_014008.1.
    YP_003548010.1. NC_014008.1.

    3D structure databases

    ProteinModelPortali D5EQ72.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADE53840 ; ADE53840 ; Caka_0816 .
    GeneIDi 8957936.
    KEGGi caa:Caka_0816.
    PATRICi 35442220. VBICorAka2911_0794.

    Phylogenomic databases

    HOGENOMi HOG000124379.
    KOi K01815.
    OMAi EIGHREA.

    Enzyme and pathway databases

    UniPathwayi UPA00545 ; UER00826 .
    BioCyci CAKA583355:GI4D-823-MONOMER.

    Family and domain databases

    Gene3Di 2.60.120.500. 1 hit.
    2.60.120.520. 1 hit.
    HAMAPi MF_00687. KduI.
    InterProi IPR007045. KduI.
    IPR021120. KduI/IolB_isomerase.
    IPR027447. KduI_C.
    IPR027449. KduI_N.
    IPR011051. RmlC_Cupin.
    [Graphical view ]
    Pfami PF04962. KduI. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006625. KduI. 1 hit.
    SUPFAMi SSF51182. SSF51182. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865Imported.

    Entry informationi

    Entry nameiD5EQ72_CORAD
    AccessioniPrimary (citable) accession number: D5EQ72
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 15, 2010
    Last sequence update: June 15, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3