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D5EP32

- D5EP32_CORAD

UniProt

D5EP32 - D5EP32_CORAD

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Protein
Submitted name:

Isocitrate dehydrogenase, NADP-dependent

Gene
Caka_2526
Organism
Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein predictedi

Functioni

Cofactori

Binds 1 magnesium or manganese ion per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei146 – 1461Substrate By similarityUniRule annotation
Sitei255 – 2551Critical for catalysis By similarityUniRule annotation
Metal bindingi350 – 3501Magnesium or manganese By similarityUniRule annotation
Sitei420 – 4201Critical for catalysis By similarityUniRule annotation
Binding sitei547 – 5471Substrate By similarityUniRule annotation
Metal bindingi548 – 5481Magnesium or manganese By similarityUniRule annotation
Metal bindingi552 – 5521Magnesium or manganese By similarityUniRule annotation

GO - Molecular functioni

  1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
  2. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciCAKA583355:GI4D-2571-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Isocitrate dehydrogenase, NADP-dependentImported (EC:1.1.1.42Imported)
Gene namesi
Ordered Locus Names:Caka_2526Imported
OrganismiCoraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865)Imported
Taxonomic identifieri583355 [NCBI]
Taxonomic lineageiBacteriaVerrucomicrobiaOpitutaePuniceicoccalesPuniceicoccaceaeCoraliomargarita
ProteomesiUP000000925: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD5EP32.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni133 – 1408Substrate binding By similarityUniRule annotation

Phylogenomic databases

HOGENOMiHOG000240860.
KOiK00031.
OMAiEEQRIGD.

Family and domain databases

Gene3Di3.40.718.10. 3 hits.
InterProiIPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PfamiPF03971. IDH. 1 hit.
[Graphical view]
PIRSFiPIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsiTIGR00178. monomer_idh. 1 hit.

Sequencei

Sequence statusi: Complete.

D5EP32-1 [UniParc]FASTAAdd to Basket

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MSDKEKILYT ITDEAPALAT HSLLPIISAY TAAAGVSVET RDISLSGRIL    50
ANFPDYLTED QQISDALAEL GELAKTPEAN IIKLPNISAS IPQMKAAIAE 100
LQAQGYKLPD YPEEASSDEE QSIKARYDKI KGSAVNPVLR EGNSDRRAAA 150
AVKQYAKNNP HRMGAWASDS KSVVSSMSGN DFFGNEKSVT IPEATTAKIE 200
LVTAEGVTVL KDGLALQAGE VLDGTFMSAK ALRAFLAEQV CATKEAGTLF 250
SLHMKATMMK VSDPIIFGHC VEVFYKAVFE KHADVIAELG VDVKNGLGDL 300
YAKIESLPAD KKAEIEADIA AVYATAPDIA MVDSDKGITN LHVPSDVIID 350
ASMPAAIRDS GKMWNTAGER QDANFVIPDR CYSGVYAATV EFCKQNGAFD 400
PATMGTVPNV GLMAQKAEEY GSHDKTFEIS AAGTVRVSDA AGNVLFEHAV 450
EEGDIWRACQ VKDAPIRDWV KLAVTRARAT GAPAIFWLNK ERAHDANLIA 500
KVEEYLKDHD TDGLDIRILA PVEATQVTLE RAKAGEDTIS VTGNVLRDYL 550
TDLFPILELG TSAKMLSIVP LMNGGGLFET GAGGSAPKHV QQFEKENHLR 600
WDSLGEFLAL GVSLEHLATV FNNDKAQVLA ETLDVANTKF LEENKSPSRK 650
VNELDNRGSH FYLALYWAQA LAAQGQDAEL KARFAPLADA LTSNESKIVD 700
ELNSAQGVAM DIAGYYRPSD ELASKAMRPS ETFNAALAAL 740
Length:740
Mass (Da):79,740
Last modified:June 15, 2010 - v1
Checksum:i96CCF455EAF999AB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001998 Genomic DNA. Translation: ADE55542.1.
RefSeqiWP_013044264.1. NC_014008.1.
YP_003549712.1. NC_014008.1.

Genome annotation databases

EnsemblBacteriaiADE55542; ADE55542; Caka_2526.
GeneIDi8959683.
KEGGicaa:Caka_2526.
PATRICi35445706. VBICorAka2911_2505.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001998 Genomic DNA. Translation: ADE55542.1 .
RefSeqi WP_013044264.1. NC_014008.1.
YP_003549712.1. NC_014008.1.

3D structure databases

ProteinModelPortali D5EP32.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE55542 ; ADE55542 ; Caka_2526 .
GeneIDi 8959683.
KEGGi caa:Caka_2526.
PATRICi 35445706. VBICorAka2911_2505.

Phylogenomic databases

HOGENOMi HOG000240860.
KOi K00031.
OMAi EEQRIGD.

Enzyme and pathway databases

BioCyci CAKA583355:GI4D-2571-MONOMER.

Family and domain databases

Gene3Di 3.40.718.10. 3 hits.
InterProi IPR004436. Isocitrate_DH_NADP_mono.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view ]
Pfami PF03971. IDH. 1 hit.
[Graphical view ]
PIRSFi PIRSF009407. IDH_monmr. 1 hit.
TIGRFAMsi TIGR00178. monomer_idh. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865.

Entry informationi

Entry nameiD5EP32_CORAD
AccessioniPrimary (citable) accession number: D5EP32
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: September 3, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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