D5EM32 (D5EM32_CORAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Catalytic domain of components of various dehydrogenase complexes EMBL ADE55192.1

Gene names

Ordered Locus Names:

Caka_2174

Organism

Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) [Complete proteome] [HAMAP]

Taxonomic identifier

583355 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Chlamydiae/Verrucomicrobia group › Verrucomicrobia › Opitutae › Puniceicoccales › Puniceicoccaceae › Coraliomargarita › Coraliomargarita akajimensis

Protein attributes

Sequence length	428 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Domain	Lipoyl RuleBase RU003765
Molecular function	Acyltransferase RuleBase RU003765 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	transferase activity, transferring acyl groups Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5EM32 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: F3D29CD2C2A60886	FASTA	428	43,732
	10 20 30 40 50 60 MATLIDMPKL SDTMTVGTLV KWLKNEGDPV ESGDMIAEVE TDKATMEVEC FEDGVLIKQY 70 80 90 100 110 120 CGAGDEVPVG GAIAAIGDAG EEAPAVDNAA PAPAAEEAPK AEALAAPAPA APTPAPAATP 130 140 150 160 170 180 APAPAAPAPA AGGARVKASP VAKKIAAEKG IDLSTIQGSG PGGRIVKEDV LNAKPGAAPA 190 200 210 220 230 240 AGGAPAAPAA PAATLEALDI PVSNMRKSIA KALVGSKTQA PHFYLQMEVD GAPLAELRKE 250 260 270 280 290 300 LNAKLAELPA EHGGTKFTVN DLTLKAAAEA VRRVPAINRS WEGDIIKQHA NVHLAFGVAI 310 320 330 340 350 360 DDGLVTPVIR AAETKGLRQI GAEAKVLIKK AREKKLTPDE MSGSTLTVTN LGMFGVSDFY 370 380 390 400 410 420 GIINPNNACI LSIGATIKKP VVKGDQIVIG QTMKIGLSGD HRTIDGAVGA QYLQALKEIL ETPALMLV

References

[1]

"Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24)." Mavromatis K., Abt B., Brambilla E., Lapidus A., Copeland A., Desphande S., Nolan M., Lucas S., Tice H., Cheng J., Han C., Detter J., Woyke T., Goodwin L., Pitluck S., Held B., Brettin T., Tapia R. , Ivanova N., Mikhailova N., Pati A., Liolios K., Chen A., Palaniappan K., Land M., Hauser L., Chang Y., Jeffries C., Rohde M., Goker M., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Klenk H., Kyrpides N. Stand. Genomic Sci. 2:290-299(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001998 Genomic DNA. Translation: ADE55192.1.
RefSeq	YP_003549362.1. NC_014008.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE55192; ADE55192; Caka_2174.
GeneID	8959326.
KEGG	caa:Caka_2174.
PATRIC	35444984. VBICorAka2911_2148.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000281566.
KO	K00627.
OMA	GTICISN.
Enzyme and pathway databases
BioCyc	CAKA583355:GI4D-2213-MONOMER.
Family and domain databases
Gene3D	3.30.559.10. 1 hit. 4.10.320.10. 1 hit.
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR000089. Biotin_lipoyl. IPR023213. CAT-like_dom. IPR004167. E3-bd. IPR011053. Single_hybrid_motif. [Graphical view]
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00364. Biotin_lipoyl. 1 hit. PF02817. E3_binding. 1 hit. [Graphical view]
SUPFAM	SSF47005. E3_bd. 1 hit. SSF51230. Hybrid_motif. 1 hit.
PROSITE	PS50968. BIOTINYL_LIPOYL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5EM32_CORAD

Accession

Primary (citable) accession number: D5EM32

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)