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D5EG24 (D5EG24_AMICL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase EMBL ADE57506.1
EC=5.1.1.1 EMBL ADE57506.1
Gene names
Ordered Locus Names:Amico_1389
OrganismAminobacterium colombiense (strain DSM 12261 / ALA-1) [Complete proteome] [HAMAP] EMBL ADE57506.1
Taxonomic identifier572547 [NCBI]
Taxonomic lineageBacteria › Synergistetes › Synergistia › Synergistales › Synergistaceae › Aminobacterium ›

Protein attributes

Sequence length372 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ADE57506.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5EG24 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 3555EB62AB553E8D

FASTA37240,821
        10         20         30         40         50         60 
MFLRPTRMEV NLANIQSNFK TIRRHVGAGP QIMAVVKADA YGHGAVEVAK SLIEAGCQRF 

        70         80         90        100        110        120 
AVATPDEAVV LREAGINDPI LVLGPSPYDA ASAYVKHDIS AALTDLVFAQ MMSREAVNQG 

       130        140        150        160        170        180 
KTALLHLKID TGMGRIGFLP EQIPGIIDDI LKLPGIKIEG LFTHFATADE KRLDYTNQQF 

       190        200        210        220        230        240 
ARYMKVYHFL ESKGVRVPLR HVCNSAAVLN SPEKHLDAVR PGIILYGMYP SSECIRPIEL 

       250        260        270        280        290        300 
KPTFEVKTAI AAVKEISSNS GVGYGLRYMS RGTEKIAVLP IGYGDGFSRC LSMKVPVLVH 

       310        320        330        340        350        360 
GKRVSLVGNI CMDQTMIDVT DIEDVKVGDE VVIVGRQGEE AITPEEIAPA RGTINYEIPI 

       370 
MFSKRVPRVY IR

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001997 Genomic DNA. Translation: ADE57506.1.
RefSeqYP_003554230.1. NC_014011.1.

3D structure databases

ProteinModelPortalD5EG24.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE57506; ADE57506; Amico_1389.
GeneID8964340.
KEGGaco:Amico_1389.
PATRIC35455102. VBIAmiCol31354_1443.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000031444.
KOK01775.
OMARISESIP.

Enzyme and pathway databases

BioCycACOL572547:GHQ0-1442-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5EG24_AMICL
AccessionPrimary (citable) accession number: D5EG24
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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