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D5ECQ3 (D5ECQ3_AMICL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
D-alanine--D-alanine ligase EMBL ADE56335.1
EC=6.3.2.4 EMBL ADE56335.1
Gene names
Ordered Locus Names:Amico_0188
OrganismAminobacterium colombiense (strain DSM 12261 / ALA-1) [Complete proteome] [HAMAP] EMBL ADE56335.1
Taxonomic identifier572547 [NCBI]
Taxonomic lineageBacteria › Synergistetes › Synergistia › Synergistales › Synergistaceae › Aminobacterium ›

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. SAAS SAAS005905

Subcellular location

Cytoplasm By similarity SAAS SAAS005905.

Sequence similarities

Contains 1 ATP-grasp domain. SAAS SAAS005905

Sequences

Sequence LengthMass (Da)Tools
D5ECQ3 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 02D15E90D7BF5105

FASTA36741,517
        10         20         30         40         50         60 
MERRHEEERE NPLPLKKRKK EVQVIGITYN LRKDAQADEP DDIYEEYDCL ETVEALSNEI 

        70         80         90        100        110        120 
ASLGFQVFLF EQNELLLQKL DSIAPDFVLN IAEGLGNYRG RESQVPCILE SLNIPFSGSD 

       130        140        150        160        170        180 
SASLAIALDK VLTSHVLRAS NIPAPKNYVA KLPQDTTEKK VIFNTCQKYI IKPRWEGSSK 

       190        200        210        220        230        240 
GIFLDSIADT PEKVKTCIKR IWERYNQPAI VEEFLPGIEI TAGVAGNTQP KCIGMMSITP 

       250        260        270        280        290        300 
VTENSSFLYS LEEKRNYLER IRYSGPDSMS PQLRKKIGDL AVRAFKALEL RDIARIDFRL 

       310        320        330        340        350        360 
DDKGQPRVID INPLPGLSPA YSDLPILYRL SGGEYSELIQ TILREAFSRY GLCAPCLNKP 


ELVREKA

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001997 Genomic DNA. Translation: ADE56335.1.
RefSeqYP_003553059.1. NC_014011.1.

3D structure databases

ProteinModelPortalD5ECQ3.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE56335; ADE56335; Amico_0188.
GeneID8963086.
KEGGaco:Amico_0188.
PATRIC35452510. VBIAmiCol31354_0197.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000011592.
KOK01921.
OMAEIYFLEV.

Enzyme and pathway databases

BioCycACOL572547:GHQ0-188-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMSSF52440. PreATP-grasp-like. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5ECQ3_AMICL
AccessionPrimary (citable) accession number: D5ECQ3
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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