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D5ECQ3

- D5ECQ3_AMICL

UniProt

D5ECQ3 - D5ECQ3_AMICL

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Protein
Submitted name:

D-alanine--D-alanine ligase

Gene

Amico_0188

Organism
Aminobacterium colombiense (strain DSM 12261 / ALA-1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi

Functioni

Cell wall formation.SAAS annotation

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotation

Cofactori

Note: Binds 2 magnesium or manganese ions per subunit.SAAS annotation

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: UniProtKB-EC
  3. metal ion binding Source: UniProtKB-KW

GO - Biological processi

  1. cell wall organization Source: UniProtKB-KW
  2. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  3. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotation, Peptidoglycan synthesisSAAS annotation

Keywords - Ligandi

ATP-bindingSAAS annotation, MagnesiumSAAS annotation, ManganeseSAAS annotation, Metal-bindingSAAS annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciACOL572547:GHQ0-188-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligaseImported (EC:6.3.2.4Imported)
Gene namesi
Ordered Locus Names:Amico_0188Imported
OrganismiAminobacterium colombiense (strain DSM 12261 / ALA-1)Imported
Taxonomic identifieri572547 [NCBI]
Taxonomic lineageiBacteriaSynergistetesSynergistiaSynergistalesSynergistaceaeAminobacterium
ProteomesiUP000002366: Chromosome

Subcellular locationi

Cytoplasm SAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliD5ECQ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotation

Phylogenomic databases

HOGENOMiHOG000011592.
KOiK01921.
OMAiFLEVNPL.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D5ECQ3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MERRHEEERE NPLPLKKRKK EVQVIGITYN LRKDAQADEP DDIYEEYDCL
60 70 80 90 100
ETVEALSNEI ASLGFQVFLF EQNELLLQKL DSIAPDFVLN IAEGLGNYRG
110 120 130 140 150
RESQVPCILE SLNIPFSGSD SASLAIALDK VLTSHVLRAS NIPAPKNYVA
160 170 180 190 200
KLPQDTTEKK VIFNTCQKYI IKPRWEGSSK GIFLDSIADT PEKVKTCIKR
210 220 230 240 250
IWERYNQPAI VEEFLPGIEI TAGVAGNTQP KCIGMMSITP VTENSSFLYS
260 270 280 290 300
LEEKRNYLER IRYSGPDSMS PQLRKKIGDL AVRAFKALEL RDIARIDFRL
310 320 330 340 350
DDKGQPRVID INPLPGLSPA YSDLPILYRL SGGEYSELIQ TILREAFSRY
360
GLCAPCLNKP ELVREKA
Length:367
Mass (Da):41,517
Last modified:June 15, 2010 - v1
Checksum:i02D15E90D7BF5105
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001997 Genomic DNA. Translation: ADE56335.1.
RefSeqiYP_003553059.1. NC_014011.1.

Genome annotation databases

EnsemblBacteriaiADE56335; ADE56335; Amico_0188.
GeneIDi8963086.
KEGGiaco:Amico_0188.
PATRICi35452510. VBIAmiCol31354_0197.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001997 Genomic DNA. Translation: ADE56335.1 .
RefSeqi YP_003553059.1. NC_014011.1.

3D structure databases

ProteinModelPortali D5ECQ3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADE56335 ; ADE56335 ; Amico_0188 .
GeneIDi 8963086.
KEGGi aco:Amico_0188.
PATRICi 35452510. VBIAmiCol31354_0197.

Phylogenomic databases

HOGENOMi HOG000011592.
KOi K01921.
OMAi FLEVNPL.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci ACOL572547:GHQ0-188-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 1 hit.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 1 hit.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 12261 / ALA-1Imported.

Entry informationi

Entry nameiD5ECQ3_AMICL
AccessioniPrimary (citable) accession number: D5ECQ3
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: November 26, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3