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D5EB97 (D5EB97_METMS) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.39 EMBL ADE36448.1
Gene names
Ordered Locus Names:Mmah_0928 EMBL ADE36448.1
OrganismMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) [Complete proteome] [HAMAP] EMBL ADE36448.1
Taxonomic identifier547558 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanohalophilus

Protein attributes

Sequence length474 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ADE36448.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5EB97 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: FF58FC61D1FF583F

FASTA47452,840
        10         20         30         40         50         60 
MSSKIEELVQ SLNPKQQGYV NLELPDPTNG EYLLTVFRLV PGGEMNMLQA AAEIAAESST 

        70         80         90        100        110        120 
GTNFRVNTET KFSKVMNALV YQMDLERELV WIAYPWRLFD RGGNVQNILT YIVGNVLGMK 

       130        140        150        160        170        180 
EISALKLLDV WFPPSMLEQY DGPGFTVDDM RSYLGVYDRP ILGTIVKPKM GLTSAEYAEV 

       190        200        210        220        230        240 
CYDFWAGGGD FVKNDEPQAN QDFCPYDKMV KHVKEAMDKA VKETGKKKVH SFNVSAPDFD 

       250        260        270        280        290        300 
TMIERCEMIR NAGFEPGSYA FLIDGITAGW MAVQTIRRRY PDVFLHFHRA AHGAFTRPEN 

       310        320        330        340        350        360 
PIGFSVLVLS KFARLAGASG IHTGTAGVGK MKGTPEEDVV AAHGIQYLSS HGHFFDQSWA 

       370        380        390        400        410        420 
KIMETDKDAI ELVNEDIAHH VILEKDSWRG MKKCCPIVSG GLNPVRLKPF IDVMGNVDFI 

       430        440        450        460        470 
TTMGSGVHAH PEGTRSGAKA LIQACDAYLQ GIDIKDYAKN HRELEQAIEF FPEK 

« Hide

References

[1]"The complete genome of Methanohalophilus mahii DSM 5219."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35705 / DSM 5219 / SLP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001994 Genomic DNA. Translation: ADE36448.1.
RefSeqYP_003542093.1. NC_014002.1.

3D structure databases

ProteinModelPortalD5EB97.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE36448; ADE36448; Mmah_0928.
GeneID8983092.
KEGGmmh:Mmah_0928.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.
OMAITAGWMA.

Enzyme and pathway databases

BioCycMMAH547558:GHP5-962-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 2 hits.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5EB97_METMS
AccessionPrimary (citable) accession number: D5EB97
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: January 22, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)