D5EB97 (D5EB97_METMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-bisphosphate carboxylase EMBL ADE36448.1
EC=4.1.1.39 EMBL ADE36448.1

Gene names

Ordered Locus Names:

Mmah_0928

Organism

Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) [Complete proteome] [HAMAP] EMBL ADE36448.1

Taxonomic identifier

547558 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanohalophilus › Methanohalophilus mahii

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ADE36448.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5EB97 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: FF58FC61D1FF583F	FASTA	474	52,840
	10 20 30 40 50 60 MSSKIEELVQ SLNPKQQGYV NLELPDPTNG EYLLTVFRLV PGGEMNMLQA AAEIAAESST 70 80 90 100 110 120 GTNFRVNTET KFSKVMNALV YQMDLERELV WIAYPWRLFD RGGNVQNILT YIVGNVLGMK 130 140 150 160 170 180 EISALKLLDV WFPPSMLEQY DGPGFTVDDM RSYLGVYDRP ILGTIVKPKM GLTSAEYAEV 190 200 210 220 230 240 CYDFWAGGGD FVKNDEPQAN QDFCPYDKMV KHVKEAMDKA VKETGKKKVH SFNVSAPDFD 250 260 270 280 290 300 TMIERCEMIR NAGFEPGSYA FLIDGITAGW MAVQTIRRRY PDVFLHFHRA AHGAFTRPEN 310 320 330 340 350 360 PIGFSVLVLS KFARLAGASG IHTGTAGVGK MKGTPEEDVV AAHGIQYLSS HGHFFDQSWA 370 380 390 400 410 420 KIMETDKDAI ELVNEDIAHH VILEKDSWRG MKKCCPIVSG GLNPVRLKPF IDVMGNVDFI 430 440 450 460 470 TTMGSGVHAH PEGTRSGAKA LIQACDAYLQ GIDIKDYAKN HRELEQAIEF FPEK

References

[1]

"The complete genome of Methanohalophilus mahii DSM 5219." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35705 / DSM 5219 / SLP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001994 Genomic DNA. Translation: ADE36448.1.
RefSeq	YP_003542093.1. NC_014002.1.
3D structure databases
ProteinModelPortal	D5EB97.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE36448; ADE36448; Mmah_0928.
GeneID	8983092.
KEGG	mmh:Mmah_0928.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
OMA	NQYLHYH.
Enzyme and pathway databases
BioCyc	MMAH547558:GHP5-961-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR020878. RuBisCo_large_chain_AS. IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. IPR017444. RuBisCO_lsu_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 2 hits. PF02788. RuBisCO_large_N. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
PROSITE	PS00157. RUBISCO_LARGE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5EB97_METMS

Accession

Primary (citable) accession number: D5EB97

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)