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D5EAW9 (D5EAW9_METMS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ribosomal RNA-processing protein RRP42 EMBL ADE36320.1
EC=3.1.13.- EMBL ADE36320.1
Gene names
Ordered Locus Names:Mmah_0797
OrganismMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) [Complete proteome] [HAMAP] EMBL ADE36320.1
Taxonomic identifier547558 [NCBI]
Taxonomic lineageArchaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanohalophilus ›

Protein attributes

Sequence length261 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ADE36320.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionhydrolase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5EAW9 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 5E8CDF5293D46950

FASTA26128,346
        10         20         30         40         50         60 
MSGSEVISRL KRDYIYNLML KGEREDGRQF NELRDIALET GIIDKAEGSA MVQYGDTQVM 

        70         80         90        100        110        120 
VGVKMQVGTP FPDSPAEGVI ITSMELNPIA SPDFEAGPPR EKAIEMGRIV DRGIRESGAI 

       130        140        150        160        170        180 
DINKLCITEG EEVWMVFIDV HVLNNSGNIL DAASLGAIAA LMTTTVPSER EGKGEDYPMP 

       190        200        210        220        230        240 
VREMPVGVSL VKIGDEMVLD PTYGEESVCE TRITISSNQD GSICSMQKSG SGSLSPAQVV 

       250        260 
KASKIAKEKG EIIREKYLLE I

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References

[1]"The complete genome of Methanohalophilus mahii DSM 5219."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35705 / DSM 5219 / SLP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001994 Genomic DNA. Translation: ADE36320.1.
RefSeqYP_003541965.1. NC_014002.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE36320; ADE36320; Mmah_0797.
GeneID8982959.
KEGGmmh:Mmah_0797.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229504.
KOK12589.
OMAQAASQFI.

Enzyme and pathway databases

BioCycMMAH547558:GHP5-828-MONOMER.

Family and domain databases

InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR020568. Ribosomal_S5_D2-typ_fold.
[Graphical view]
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMSSF55666. 3_ExoRNase. 1 hit.
SSF54211. Ribosomal_S5_D2-typ_fold. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5EAW9_METMS
AccessionPrimary (citable) accession number: D5EAW9
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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