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Protein
Submitted name:

DNA ligase D, 3'-phosphoesterase domain protein

Gene

Mmah_0746

Organism
Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ligase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMMAH547558:GHP5-776-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D, 3'-phosphoesterase domain proteinImported
Gene namesi
Ordered Locus Names:Mmah_0746Imported
OrganismiMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP)Imported
Taxonomic identifieri547558 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanohalophilus
ProteomesiUP000001059 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000046158.
OMAiIETEDHP.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.

Sequencei

Sequence statusi: Complete.

D5EAR9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLEEYRKKRD FDRTSEPEAK GTSRSGEPIF VIQKHDASNL HYDLRLEMNG
60 70 80 90 100
VLKSWAVPKQ PPKKAGIKRL AIQTEDHPME YADFEGEIPE GQYGAGKVEI
110 120 130 140 150
WDRGNYEAIK IEEKEIIVTL KGKQLTGDYV LVKTKYGNND KGWLFFKKKV

EN
Length:152
Mass (Da):17,561
Last modified:June 15, 2010 - v1
Checksum:i9B3C515C76D5DCEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001994 Genomic DNA. Translation: ADE36270.1.
RefSeqiWP_013037213.1. NC_014002.1.
YP_003541915.1. NC_014002.1.

Genome annotation databases

EnsemblBacteriaiADE36270; ADE36270; Mmah_0746.
GeneIDi8982907.
KEGGimmh:Mmah_0746.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001994 Genomic DNA. Translation: ADE36270.1.
RefSeqiWP_013037213.1. NC_014002.1.
YP_003541915.1. NC_014002.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADE36270; ADE36270; Mmah_0746.
GeneIDi8982907.
KEGGimmh:Mmah_0746.

Phylogenomic databases

HOGENOMiHOG000046158.
OMAiIETEDHP.

Enzyme and pathway databases

BioCyciMMAH547558:GHP5-776-MONOMER.

Family and domain databases

InterProiIPR014144. LigD_PE_domain.
[Graphical view]
PfamiPF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35705 / DSM 5219 / SLPImported.

Entry informationi

Entry nameiD5EAR9_METMS
AccessioniPrimary (citable) accession number: D5EAR9
Entry historyi
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: March 4, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.