ID   D5E8P2_METMS            Unreviewed;       388 AA.
AC   D5E8P2;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   27-MAR-2024, entry version 54.
DE   SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:ADE35551.1};
GN   OrderedLocusNames=Mmah_0013 {ECO:0000313|EMBL:ADE35551.1};
OS   Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia;
OC   Methanosarcinales; Methanosarcinaceae; Methanohalophilus.
OX   NCBI_TaxID=547558 {ECO:0000313|EMBL:ADE35551.1, ECO:0000313|Proteomes:UP000001059};
RN   [1] {ECO:0000313|EMBL:ADE35551.1, ECO:0000313|Proteomes:UP000001059}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 35705 / DSM 5219 / SLP
RC   {ECO:0000313|Proteomes:UP000001059};
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA   Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N.,
RA   Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M.,
RA   Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D.,
RA   Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Methanohalophilus mahii DSM 5219.";
RL   Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP001994; ADE35551.1; -; Genomic_DNA.
DR   RefSeq; WP_013036494.1; NC_014002.1.
DR   AlphaFoldDB; D5E8P2; -.
DR   STRING; 547558.Mmah_0013; -.
DR   GeneID; 8982144; -.
DR   KEGG; mmh:Mmah_0013; -.
DR   HOGENOM; CLU_061502_0_0_2; -.
DR   OrthoDB; 14524at2157; -.
DR   Proteomes; UP000001059; Chromosome.
DR   GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR   CDD; cd07894; Adenylation_RNA_ligase; 1.
DR   Gene3D; 3.10.450.740; -; 1.
DR   Gene3D; 3.30.1490.70; -; 1.
DR   Gene3D; 3.30.70.2160; -; 1.
DR   Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR   InterPro; IPR041596; Lig_Pab1020_C.
DR   InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR   InterPro; IPR001072; RNA_ligase_Pab1020.
DR   NCBIfam; TIGR01209; RNA ligase; 1.
DR   Pfam; PF18330; Lig_C; 1.
DR   Pfam; PF09414; RNA_ligase; 1.
DR   PRINTS; PR01048; Y414FAMILY.
DR   SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
PE   4: Predicted;
KW   Ligase {ECO:0000313|EMBL:ADE35551.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001059}.
FT   DOMAIN          96..251
FT                   /note="RNA ligase"
FT                   /evidence="ECO:0000259|Pfam:PF09414"
FT   DOMAIN          262..386
FT                   /note="RNA ligase Pab1020 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF18330"
SQ   SEQUENCE   388 AA;  44843 MW;  6C374949E604D681 CRC64;
     MKGSEKPELD MEKTARFLGL SVSRLERLLE KRLLSRNWGK YKNLFRFETS VSGIERGSVL
     LQKRDGELDL ILGFPKIQRA MLLEPSINNH FSEIDKLIVE EKMNGYNVRV IENAGKLIAF
     TRSGHVCPYS TEKVNYLLDP SFFRQYPDLV VHGEMAGPEN PYVSKKVYDT QTLDFFVFDI
     RHKKTGQPLP VIQRRKLAAS FGFKQVPFLG EFARKEAAEK IMSIIKKLGD MGHEGVVIKD
     LDMDLSPIKY TCSESNCADL EHAFKFYNEV GRDYLYSRVV REGFQTVEWD EDEDTMEKRC
     LRLGKSILSP MADSVRRVGN GEKLYDEVTL RFQNPQTLQE FEEYFRRLGI DAIFDRVGYS
     GGELMVNLQK LNQSTTDKTE SMWEGNLW
//