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D5E8P2 (D5E8P2_METMS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Mmah_0013 EMBL ADE35551.1
OrganismMethanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) [Complete proteome] [HAMAP] EMBL ADE35551.1
Taxonomic identifier547558 [NCBI]
Taxonomic lineageArchaeaEuryarchaeotaMethanomicrobiaMethanosarcinalesMethanosarcinaceaeMethanohalophilus

Protein attributes

Sequence length388 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADE35551.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D5E8P2 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 6C374949E604D681

FASTA38844,843
        10         20         30         40         50         60 
MKGSEKPELD MEKTARFLGL SVSRLERLLE KRLLSRNWGK YKNLFRFETS VSGIERGSVL 

        70         80         90        100        110        120 
LQKRDGELDL ILGFPKIQRA MLLEPSINNH FSEIDKLIVE EKMNGYNVRV IENAGKLIAF 

       130        140        150        160        170        180 
TRSGHVCPYS TEKVNYLLDP SFFRQYPDLV VHGEMAGPEN PYVSKKVYDT QTLDFFVFDI 

       190        200        210        220        230        240 
RHKKTGQPLP VIQRRKLAAS FGFKQVPFLG EFARKEAAEK IMSIIKKLGD MGHEGVVIKD 

       250        260        270        280        290        300 
LDMDLSPIKY TCSESNCADL EHAFKFYNEV GRDYLYSRVV REGFQTVEWD EDEDTMEKRC 

       310        320        330        340        350        360 
LRLGKSILSP MADSVRRVGN GEKLYDEVTL RFQNPQTLQE FEEYFRRLGI DAIFDRVGYS 

       370        380 
GGELMVNLQK LNQSTTDKTE SMWEGNLW 

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References

[1]"The complete genome of Methanohalophilus mahii DSM 5219."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A.
Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 35705 / DSM 5219 / SLP.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001994 Genomic DNA. Translation: ADE35551.1.
RefSeqYP_003541196.1. NC_014002.1.

3D structure databases

ProteinModelPortalD5E8P2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE35551; ADE35551; Mmah_0013.
GeneID8982144.
KEGGmmh:Mmah_0013.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.

Enzyme and pathway databases

BioCycMMAH547558:GHP5-13-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD5E8P2_METMS
AccessionPrimary (citable) accession number: D5E8P2
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: April 16, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)