D5E8P2 (D5E8P2_METMS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADE35551.1

Gene names

Ordered Locus Names:

Mmah_0013

Organism

Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) [Complete proteome] [HAMAP] EMBL ADE35551.1

Taxonomic identifier

547558 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanomicrobia › Methanosarcinales › Methanosarcinaceae › Methanohalophilus › Methanohalophilus mahii

Protein attributes

Sequence length	388 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADE35551.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5E8P2 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: 6C374949E604D681	FASTA	388	44,843
	10 20 30 40 50 60 MKGSEKPELD MEKTARFLGL SVSRLERLLE KRLLSRNWGK YKNLFRFETS VSGIERGSVL 70 80 90 100 110 120 LQKRDGELDL ILGFPKIQRA MLLEPSINNH FSEIDKLIVE EKMNGYNVRV IENAGKLIAF 130 140 150 160 170 180 TRSGHVCPYS TEKVNYLLDP SFFRQYPDLV VHGEMAGPEN PYVSKKVYDT QTLDFFVFDI 190 200 210 220 230 240 RHKKTGQPLP VIQRRKLAAS FGFKQVPFLG EFARKEAAEK IMSIIKKLGD MGHEGVVIKD 250 260 270 280 290 300 LDMDLSPIKY TCSESNCADL EHAFKFYNEV GRDYLYSRVV REGFQTVEWD EDEDTMEKRC 310 320 330 340 350 360 LRLGKSILSP MADSVRRVGN GEKLYDEVTL RFQNPQTLQE FEEYFRRLGI DAIFDRVGYS 370 380 GGELMVNLQK LNQSTTDKTE SMWEGNLW

References

[1]

"The complete genome of Methanohalophilus mahii DSM 5219." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Lykidis A., Saunders E., Brettin T., Detter J.C., Han C., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schneider S., Schroeder M., Klenk H.-P., Eisen J.A. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35705 / DSM 5219 / SLP.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001994 Genomic DNA. Translation: ADE35551.1.
RefSeq	YP_003541196.1. NC_014002.1.
3D structure databases
ProteinModelPortal	D5E8P2.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE35551; ADE35551; Mmah_0013.
GeneID	8982144.
KEGG	mmh:Mmah_0013.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
Enzyme and pathway databases
BioCyc	MMAH547558:GHP5-13-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D5E8P2_METMS

Accession

Primary (citable) accession number: D5E8P2

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)