D5E526 (D5E526_MYCCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 HAMAP-Rule MF_00382 RuleBase RU000560

Gene names

Name:	rplT HAMAP-Rule MF_00382 EMBL ADE19914.1
Ordered Locus Names:	MCRO_0215 EMBL ADE19914.1

Organism

Mycoplasma crocodyli (strain ATCC 51981 / MP145) [Complete proteome] [HAMAP] EMBL ADE19914.1

Taxonomic identifier

512564 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Tenericutes › Mollicutes › Mycoplasmatales › Mycoplasmataceae › Mycoplasma › Mycoplasma crocodyli

Protein attributes

Sequence length	117 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. HAMAP-Rule MF_00382 RuleBase RU000560
Sequence similarities	Belongs to the ribosomal protein L20P family. HAMAP-Rule MF_00382 RuleBase RU000560

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00382 RuleBase RU000560
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00382 RuleBase RU000560 EMBL ADE19914.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D5E526 [UniParc]. Last modified June 15, 2010. Version 1. Checksum: E65A4128D31F6A30	FASTA	117	13,596
	10 20 30 40 50 60 MARVKGGTVT RARRKKWLKL AKGYFGHKSV GYKVAKQAVV KSWTYAFRDR KQVKRNFRKL 70 80 90 100 110 WIARINAATR AHDMSYSRFI NGLKRANILI NRKMLSELAI NEPKTFATLI ELARDAK

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The complete genome of Mycoplasma crocodyli MP145." Glass J.I., Durkin A.S., Hostetler J., Jackson J., Johnson J., May M.A., Paralanov V., Radune D., Szczypinski B., Brown D.R. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 51981 / MP145.
[2]	Ma Z., Wang X., Liu H. Submitted (MAR-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: MP145.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001991 Genomic DNA. Translation: ADE19914.1.
RefSeq	YP_003559869.1. NC_014014.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADE19914; ADE19914; MCRO_0215.
GeneID	8970673.
KEGG	mcd:MCRO_0215.
PATRIC	35465337. VBIMycCro43672_0196.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000035046.
KO	K02887.
OMA	GRRKNVW.
Enzyme and pathway databases
BioCyc	MCRO512564:GI47-213-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D5E526_MYCCM

Accession

Primary (citable) accession number: D5E526

Entry history

Integrated into UniProtKB/TrEMBL:	June 15, 2010
Last sequence update:	June 15, 2010
Last modified:	May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)