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D5E116 (D5E116_BACMQ) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.2.1.6 EMBL ADE67822.1
Gene names
Name:alsS EMBL ADE67822.1
Ordered Locus Names:BMQ_0789 EMBL ADE67822.1
OrganismBacillus megaterium (strain ATCC 12872 / QMB1551) [Complete proteome] [HAMAP] EMBL ADE67822.1
Taxonomic identifier545693 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus

Protein attributes

Sequence length559 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the TPP enzyme family. RuleBase RU003702

Sequences

Sequence LengthMass (Da)Tools
D5E116 [UniParc].

Last modified June 15, 2010. Version 1.
Checksum: 0CC0779D986A9BB1

FASTA55960,864
        10         20         30         40         50         60 
MMSNADTTET KKGADLLVES LASQNVPYIF GIPGAKIDGV FDVLKEKGPE VIVCRHEQNA 

        70         80         90        100        110        120 
AFMAAAMGRL TGTPGVCLVT SGPGAANLAT GLVTATSEGD PVVALAGAVP RADRLKKTHQ 

       130        140        150        160        170        180 
SMDNEGLFKS IAKFSVEVED AANVPEVITD AFREAVSSPS GASFVSLPQD VMDNETSAST 

       190        200        210        220        230        240 
LSVLKAPTIG AANLDAVAQA IHTIRTAKLP VLLLGMRASK SKAVESIRQL IAEHDLPVVE 

       250        260        270        280        290        300 
TFQGAGAVSR ELETHFFGRV GLFRNQPGDV LLKHADVVLT IGYDPVEYPP SLWNSESQRS 

       310        320        330        340        350        360 
IIHLDDLQAQ ADHHYQPEIE LVGDIPSTID ILADKLPHLI RSKESASFLK TLKSKLEQPD 

       370        380        390        400        410        420 
DQYEFSNDTH LHPLQLIEAL QNFVEDDTTI TCDVGSHYIW MARYFRSYEP QHLLFSNGMQ 

       430        440        450        460        470        480 
TLGVALPWAI SAALVRPHKK VLSLSGDGGF LFSAMELETA VRLNLPIVHI IWNDQTYDMV 

       490        500        510        520        530        540 
GFQQQIKYGR KSAVEFGSVD FVTLAESFGA KGFRVNSPEE FSDTLASAFR EQGPVIIDVP 

       550 
VDYKDNEKLN TQLLPDQIN 

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References

[1]"Genome sequences of the industrial vitamin B12-producers B. megaterium QM B1551 and DSM319 reveal new insights into the Bacillus genome evolution and pan-genome structure."
Eppinger M., Bunk B., Johns M.A., Edirisinghe J.N., Kutumbaka K.K., Riley D.R., Creasy H.H., Koenig S.S.K., Galens K., Orvis J., Creasy T., Biedendieck R., Braun C., Grayburn S., Jahn D., Ravel J., Vary P.S.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 12872 / QMB1551.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001983 Genomic DNA. Translation: ADE67822.1.
RefSeqYP_003561256.1. NC_014019.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADE67822; ADE67822; BMQ_0789.
GeneID8985227.
KEGGbmq:BMQ_0789.
PATRIC35478219. VBIBacMeg35839_0784.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000258447.
KOK01652.

Enzyme and pathway databases

BioCycBMEG545693:GHSY-789-MONOMER.

Family and domain databases

InterProIPR012782. Acetolactate_synth_catblc.
IPR012000. Thiamin_PyroP_enz_cen_dom.
IPR012001. Thiamin_PyroP_enz_TPP-bd_dom.
IPR000399. TPP-bd_CS.
IPR011766. TPP_enzyme-bd_C.
[Graphical view]
PfamPF02775. TPP_enzyme_C. 1 hit.
PF00205. TPP_enzyme_M. 1 hit.
PF02776. TPP_enzyme_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02418. acolac_catab. 1 hit.
PROSITEPS00187. TPP_ENZYMES. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD5E116_BACMQ
AccessionPrimary (citable) accession number: D5E116
Entry history
Integrated into UniProtKB/TrEMBL: June 15, 2010
Last sequence update: June 15, 2010
Last modified: October 16, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)